Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN12P56749 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.12□□□□□ -1.59
CLDN12P56749 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CLDN12P56749 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CLDN12P56749 AP001284.1-201ENST00000528393 2118 ntBASIC5.12□□□□□ -1.59
CLDN12P56749 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.12□□□□□ -1.59
CLDN12P56749 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CLDN12P56749 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN12P56749 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN12P56749 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN12P56749 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN12P56749 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN12P56749 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN12P56749 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN12P56749 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN12P56749 RN7SKP77-201ENST00000363261 353 ntBASIC5.11□□□□□ -1.59
CLDN12P56749 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN12P56749 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLDN12P56749 UBTFL2-201ENST00000411859 1191 ntBASIC5.11□□□□□ -1.59
CLDN12P56749 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN12P56749 AL158827.1-201ENST00000416300 391 ntBASIC5.11□□□□□ -1.59
CLDN12P56749 GPN3P1-201ENST00000423883 535 ntBASIC5.11□□□□□ -1.59
CLDN12P56749 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN12P56749 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLDN12P56749 HMGN1P32-201ENST00000441744 256 ntBASIC5.11□□□□□ -1.59
CLDN12P56749 AC016027.4-201ENST00000450866 277 ntBASIC5.11□□□□□ -1.59
CLDN12P56749 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN12P56749 RN7SL83P-201ENST00000468131 297 ntBASIC5.11□□□□□ -1.59
CLDN12P56749 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN12P56749 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.11□□□□□ -1.59
CLDN12P56749 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN12P56749 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN12P56749 MIR2117-201ENST00000516780 80 ntBASIC5.11□□□□□ -1.59
CLDN12P56749 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN12P56749 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN12P56749 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN12P56749 AC037479.1-201ENST00000558361 625 ntBASIC5.11□□□□□ -1.59
CLDN12P56749 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN12P56749 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN12P56749 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN12P56749 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.11□□□□□ -1.59
CLDN12P56749 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN12P56749 AL589765.6-201ENST00000601909 549 ntBASIC5.11□□□□□ -1.59
CLDN12P56749 AL049829.3-202ENST00000604278 711 ntBASIC5.11□□□□□ -1.59
CLDN12P56749 AL353729.2-201ENST00000605859 1249 ntBASIC5.11□□□□□ -1.59
CLDN12P56749 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN12P56749 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN12P56749 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN12P56749 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN12P56749 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN12P56749 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CLDN12P56749 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN12P56749 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN12P56749 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN12P56749 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN12P56749 AL158152.1-201ENST00000602652 1435 ntBASIC5.11□□□□□ -1.59
CLDN12P56749 AC004158.1-201ENST00000564508 4319 ntBASIC5.11□□□□□ -1.59
CLDN12P56749 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN12P56749 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN12P56749 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN12P56749 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLDN12P56749 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN12P56749 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.1□□□□□ -1.59
CLDN12P56749 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN12P56749 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN12P56749 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN12P56749 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN12P56749 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN12P56749 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN12P56749 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CLDN12P56749 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN12P56749 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
CLDN12P56749 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CLDN12P56749 RNA5SP485-201ENST00000365053 119 ntBASIC5.1□□□□□ -1.59
CLDN12P56749 RNA5SP211-201ENST00000365516 117 ntBASIC5.1□□□□□ -1.59
CLDN12P56749 RN7SKP81-201ENST00000365603 331 ntBASIC5.1□□□□□ -1.59
CLDN12P56749 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN12P56749 TRAV35-201ENST00000390462 330 ntBASIC5.1□□□□□ -1.59
CLDN12P56749 RNA5SP156-201ENST00000410250 110 ntBASIC5.1□□□□□ -1.59
CLDN12P56749 RN7SKP144-201ENST00000411108 279 ntBASIC5.1□□□□□ -1.59
CLDN12P56749 RPS7P8-201ENST00000418311 581 ntBASIC5.1□□□□□ -1.59
CLDN12P56749 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.1□□□□□ -1.59
CLDN12P56749 REREP1Y-201ENST00000422655 198 ntBASIC5.1□□□□□ -1.59
CLDN12P56749 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.1□□□□□ -1.59
CLDN12P56749 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN12P56749 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN12P56749 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN12P56749 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.1□□□□□ -1.59
CLDN12P56749 REREP2Y-201ENST00000439103 200 ntBASIC5.1□□□□□ -1.59
CLDN12P56749 NPM1P23-201ENST00000440193 849 ntBASIC5.1□□□□□ -1.59
CLDN12P56749 AL663074.2-201ENST00000440621 479 ntBASIC5.1□□□□□ -1.59
CLDN12P56749 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC5.1□□□□□ -1.59
CLDN12P56749 MED28P3-201ENST00000444288 531 ntBASIC5.1□□□□□ -1.59
CLDN12P56749 AL161722.1-201ENST00000446972 1032 ntBASIC5.1□□□□□ -1.59
CLDN12P56749 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN12P56749 AL354872.1-201ENST00000456361 967 ntBASIC5.1□□□□□ -1.59
CLDN12P56749 AC104164.1-201ENST00000460282 590 ntBASIC5.1□□□□□ -1.59
CLDN12P56749 AC020633.1-201ENST00000468439 2247 ntBASIC5.1□□□□□ -1.59
CLDN12P56749 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.1□□□□□ -1.59
CLDN12P56749 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms