Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH6P55285 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH6P55285 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.19□□□□□ -1.42
CDH6P55285 GNL2P1-201ENST00000451274 2190 ntBASIC6.19□□□□□ -1.42
CDH6P55285 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH6P55285 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CDH6P55285 RNA5SP211-201ENST00000365516 117 ntBASIC6.19□□□□□ -1.42
CDH6P55285 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH6P55285 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CDH6P55285 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.19□□□□□ -1.42
CDH6P55285 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH6P55285 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH6P55285 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH6P55285 USP24P1-201ENST00000433802 779 ntBASIC6.19□□□□□ -1.42
CDH6P55285 AL158068.1-201ENST00000506116 616 ntBASIC6.19□□□□□ -1.42
CDH6P55285 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH6P55285 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH6P55285 AC009879.1-201ENST00000520029 839 ntBASIC6.19□□□□□ -1.42
CDH6P55285 OR7E158P-201ENST00000524483 910 ntBASIC6.19□□□□□ -1.42
CDH6P55285 AC110056.1-201ENST00000525759 911 ntBASIC6.19□□□□□ -1.42
CDH6P55285 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH6P55285 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH6P55285 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH6P55285 AC026826.3-201ENST00000561747 158 ntBASIC6.19□□□□□ -1.42
CDH6P55285 AL034374.2-201ENST00000605281 548 ntBASIC6.19□□□□□ -1.42
CDH6P55285 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.19□□□□□ -1.42
CDH6P55285 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CDH6P55285 AL683826.1-201ENST00000624104 627 ntBASIC6.19□□□□□ -1.42
CDH6P55285 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH6P55285 MAPK10-261ENST00000641050 3109 ntBASIC6.19□□□□□ -1.42
CDH6P55285 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH6P55285 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CDH6P55285 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH6P55285 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH6P55285 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH6P55285 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH6P55285 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
CDH6P55285 AC008627.1-201ENST00000517511 1704 ntBASIC6.19□□□□□ -1.42
CDH6P55285 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CDH6P55285 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CDH6P55285 AL137141.1-201ENST00000624622 4836 ntBASIC6.19□□□□□ -1.42
CDH6P55285 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
CDH6P55285 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH6P55285 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CDH6P55285 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH6P55285 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH6P55285 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDH6P55285 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH6P55285 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH6P55285 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.18□□□□□ -1.42
CDH6P55285 AC099677.3-201ENST00000427081 395 ntBASIC6.18□□□□□ -1.42
CDH6P55285 RPL34P27-201ENST00000428810 349 ntBASIC6.18□□□□□ -1.42
CDH6P55285 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDH6P55285 RPL6P30-201ENST00000443382 862 ntBASIC6.18□□□□□ -1.42
CDH6P55285 AL445466.1-201ENST00000448432 357 ntBASIC6.18□□□□□ -1.42
CDH6P55285 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.18□□□□□ -1.42
CDH6P55285 AC009963.3-201ENST00000458090 486 ntBASIC6.18□□□□□ -1.42
CDH6P55285 AL603882.1-201ENST00000463059 681 ntBASIC6.18□□□□□ -1.42
CDH6P55285 AC128716.1-201ENST00000475129 166 ntBASIC6.18□□□□□ -1.42
CDH6P55285 PFN1P6-201ENST00000476786 399 ntBASIC6.18□□□□□ -1.42
CDH6P55285 PPP1R11P1-201ENST00000486095 376 ntBASIC6.18□□□□□ -1.42
CDH6P55285 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDH6P55285 AC008629.2-201ENST00000503783 483 ntBASIC6.18□□□□□ -1.42
CDH6P55285 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.18□□□□□ -1.42
CDH6P55285 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.18□□□□□ -1.42
CDH6P55285 AC084121.1-201ENST00000533882 835 ntBASIC6.18□□□□□ -1.42
CDH6P55285 AL845552.1-201ENST00000556820 323 ntBASIC6.18□□□□□ -1.42
CDH6P55285 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.18□□□□□ -1.42
CDH6P55285 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH6P55285 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH6P55285 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.18□□□□□ -1.42
CDH6P55285 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH6P55285 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CDH6P55285 AC004801.6-201ENST00000616571 978 ntBASIC6.18□□□□□ -1.42
CDH6P55285 AL355974.3-201ENST00000617383 467 ntBASIC6.18□□□□□ -1.42
CDH6P55285 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH6P55285 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
CDH6P55285 PSG10P-201ENST00000501199 1500 ntBASIC6.18□□□□□ -1.42
CDH6P55285 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH6P55285 NR1H5P-201ENST00000452683 1377 ntBASIC6.18□□□□□ -1.42
CDH6P55285 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.17□□□□□ -1.42
CDH6P55285 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.17□□□□□ -1.42
CDH6P55285 RBPJP7-201ENST00000442803 1447 ntBASIC6.17□□□□□ -1.42
CDH6P55285 RBPJP5-201ENST00000449433 1447 ntBASIC6.17□□□□□ -1.42
CDH6P55285 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDH6P55285 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CDH6P55285 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH6P55285 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDH6P55285 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CDH6P55285 SNORA51.9-201ENST00000384295 124 ntBASIC6.17□□□□□ -1.42
CDH6P55285 SETP9-201ENST00000423837 832 ntBASIC6.17□□□□□ -1.42
CDH6P55285 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.17□□□□□ -1.42
CDH6P55285 RPL12P16-201ENST00000431098 498 ntBASIC6.17□□□□□ -1.42
CDH6P55285 AC073410.1-201ENST00000435125 589 ntBASIC6.17□□□□□ -1.42
CDH6P55285 AL663074.2-201ENST00000440621 479 ntBASIC6.17□□□□□ -1.42
CDH6P55285 RPSAP40-201ENST00000442343 891 ntBASIC6.17□□□□□ -1.42
CDH6P55285 RPS7P3-201ENST00000443360 580 ntBASIC6.17□□□□□ -1.42
CDH6P55285 RBMY2AP-201ENST00000445405 1157 ntBASIC6.17□□□□□ -1.42
CDH6P55285 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC6.17□□□□□ -1.42
CDH6P55285 RBMY2CP-201ENST00000448575 1157 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms