Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RNA5SP110-201ENST00000362638 115 ntBASIC6.62□□□□□ -1.35
VCPP55072 RNA5SP478-201ENST00000364657 115 ntBASIC6.62□□□□□ -1.35
VCPP55072 UBE2V1P14-201ENST00000415815 558 ntBASIC6.62□□□□□ -1.35
VCPP55072 RPS17P17-201ENST00000419392 409 ntBASIC6.62□□□□□ -1.35
VCPP55072 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.62□□□□□ -1.35
VCPP55072 NANOGP4-201ENST00000427230 913 ntBASIC6.62□□□□□ -1.35
VCPP55072 AC112492.2-201ENST00000432774 1030 ntBASIC6.62□□□□□ -1.35
VCPP55072 AL590004.3-202ENST00000445883 451 ntBASIC6.62□□□□□ -1.35
VCPP55072 AL022237.1-201ENST00000446663 358 ntBASIC6.62□□□□□ -1.35
VCPP55072 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.62□□□□□ -1.35
VCPP55072 AC092967.1-201ENST00000449016 481 ntBASIC6.62□□□□□ -1.35
VCPP55072 AL451063.1-201ENST00000450164 1133 ntBASIC6.62□□□□□ -1.35
VCPP55072 AC103563.5-201ENST00000455643 364 ntBASIC6.62□□□□□ -1.35
VCPP55072 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.62□□□□□ -1.35
VCPP55072 RN7SL860P-201ENST00000473738 223 ntBASIC6.62□□□□□ -1.35
VCPP55072 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VCPP55072 AC106800.3-201ENST00000511389 308 ntBASIC6.62□□□□□ -1.35
VCPP55072 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.62□□□□□ -1.35
VCPP55072 AC092593.2-201ENST00000513866 913 ntBASIC6.62□□□□□ -1.35
VCPP55072 AC112191.2-201ENST00000522428 333 ntBASIC6.62□□□□□ -1.35
VCPP55072 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.62□□□□□ -1.35
VCPP55072 AC090616.1-201ENST00000583895 447 ntBASIC6.62□□□□□ -1.35
VCPP55072 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VCPP55072 AP000864.1-201ENST00000609424 650 ntBASIC6.62□□□□□ -1.35
VCPP55072 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.62□□□□□ -1.35
VCPP55072 RNA5SP440-201ENST00000612665 119 ntBASIC6.62□□□□□ -1.35
VCPP55072 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.62□□□□□ -1.35
VCPP55072 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.62□□□□□ -1.35
VCPP55072 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.62□□□□□ -1.35
VCPP55072 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
VCPP55072 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VCPP55072 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VCPP55072 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.62□□□□□ -1.35
VCPP55072 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.62□□□□□ -1.35
VCPP55072 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VCPP55072 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VCPP55072 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
VCPP55072 AC099654.3-201ENST00000447087 1546 ntBASIC6.61□□□□□ -1.35
VCPP55072 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
VCPP55072 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VCPP55072 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.61□□□□□ -1.35
VCPP55072 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VCPP55072 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VCPP55072 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VCPP55072 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
VCPP55072 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.61□□□□□ -1.35
VCPP55072 AL360271.1-201ENST00000395679 510 ntBASIC6.61□□□□□ -1.35
VCPP55072 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.61□□□□□ -1.35
VCPP55072 EMC3-AS1-205ENST00000438698 534 ntBASIC6.61□□□□□ -1.35
VCPP55072 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.61□□□□□ -1.35
VCPP55072 AP000281.1-201ENST00000444036 316 ntBASIC6.61□□□□□ -1.35
VCPP55072 AL163193.1-201ENST00000444895 788 ntBASIC6.61□□□□□ -1.35
VCPP55072 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.61□□□□□ -1.35
VCPP55072 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.61□□□□□ -1.35
VCPP55072 AC011476.1-201ENST00000466725 307 ntBASIC6.61□□□□□ -1.35
VCPP55072 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.61□□□□□ -1.35
VCPP55072 AC095052.1-201ENST00000509955 863 ntBASIC6.61□□□□□ -1.35
VCPP55072 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.61□□□□□ -1.35
VCPP55072 Y_RNA.667-201ENST00000516212 107 ntBASIC6.61□□□□□ -1.35
VCPP55072 IGLV2-28-201ENST00000520681 304 ntBASIC6.61□□□□□ -1.35
VCPP55072 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.61□□□□□ -1.35
VCPP55072 IGKV2-18-201ENST00000522607 343 ntBASIC6.61□□□□□ -1.35
VCPP55072 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.61□□□□□ -1.35
VCPP55072 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.61□□□□□ -1.35
VCPP55072 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.61□□□□□ -1.35
VCPP55072 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.61□□□□□ -1.35
VCPP55072 OR4A40P-201ENST00000533878 948 ntBASIC6.61□□□□□ -1.35
VCPP55072 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.61□□□□□ -1.35
VCPP55072 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.61□□□□□ -1.35
VCPP55072 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.61□□□□□ -1.35
VCPP55072 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.61□□□□□ -1.35
VCPP55072 AC073333.2-201ENST00000603589 769 ntBASIC6.61□□□□□ -1.35
VCPP55072 AL034374.2-201ENST00000605281 548 ntBASIC6.61□□□□□ -1.35
VCPP55072 AL008723.3-201ENST00000608926 449 ntBASIC6.61□□□□□ -1.35
VCPP55072 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VCPP55072 AC118658.2-201ENST00000618697 459 ntBASIC6.61□□□□□ -1.35
VCPP55072 AC022726.2-201ENST00000634673 547 ntBASIC6.61□□□□□ -1.35
VCPP55072 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.61□□□□□ -1.35
VCPP55072 AC068769.1-201ENST00000474767 2426 ntBASIC6.61□□□□□ -1.35
VCPP55072 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VCPP55072 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.61□□□□□ -1.35
VCPP55072 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VCPP55072 CASC19-238ENST00000641523 1558 ntBASIC6.61□□□□□ -1.35
VCPP55072 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
VCPP55072 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.61□□□□□ -1.35
VCPP55072 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VCPP55072 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
VCPP55072 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
VCPP55072 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.6□□□□□ -1.35
VCPP55072 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.6□□□□□ -1.35
VCPP55072 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.6□□□□□ -1.35
VCPP55072 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VCPP55072 AL078595.2-201ENST00000605309 1780 ntBASIC6.6□□□□□ -1.35
VCPP55072 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VCPP55072 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.6□□□□□ -1.35
VCPP55072 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VCPP55072 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
VCPP55072 MTHFD2P5-201ENST00000320415 844 ntBASIC6.6□□□□□ -1.35
VCPP55072 HMGA1P8-201ENST00000414130 321 ntBASIC6.6□□□□□ -1.35
VCPP55072 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms