Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.66□□□□□ -1.5
EFNA3P52797 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.66□□□□□ -1.5
EFNA3P52797 UGT2A3P7-201ENST00000510485 734 ntBASIC5.66□□□□□ -1.5
EFNA3P52797 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.66□□□□□ -1.5
EFNA3P52797 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.66□□□□□ -1.5
EFNA3P52797 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.66□□□□□ -1.5
EFNA3P52797 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
EFNA3P52797 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.66□□□□□ -1.5
EFNA3P52797 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.66□□□□□ -1.5
EFNA3P52797 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.66□□□□□ -1.5
EFNA3P52797 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
EFNA3P52797 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.66□□□□□ -1.5
EFNA3P52797 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.66□□□□□ -1.5
EFNA3P52797 RPL12P48-201ENST00000605620 304 ntBASIC5.66□□□□□ -1.5
EFNA3P52797 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.66□□□□□ -1.5
EFNA3P52797 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.66□□□□□ -1.5
EFNA3P52797 AP005431.1-201ENST00000618479 319 ntBASIC5.66□□□□□ -1.5
EFNA3P52797 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.66□□□□□ -1.5
EFNA3P52797 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.66□□□□□ -1.5
EFNA3P52797 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.66□□□□□ -1.5
EFNA3P52797 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
EFNA3P52797 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
EFNA3P52797 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
EFNA3P52797 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.66□□□□□ -1.5
EFNA3P52797 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.66□□□□□ -1.5
EFNA3P52797 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
EFNA3P52797 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.66□□□□□ -1.5
EFNA3P52797 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.66□□□□□ -1.5
EFNA3P52797 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
EFNA3P52797 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
EFNA3P52797 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
EFNA3P52797 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
EFNA3P52797 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
EFNA3P52797 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
EFNA3P52797 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.66□□□□□ -1.5
EFNA3P52797 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
EFNA3P52797 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
EFNA3P52797 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
EFNA3P52797 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
EFNA3P52797 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
EFNA3P52797 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
EFNA3P52797 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.65□□□□□ -1.5
EFNA3P52797 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.65□□□□□ -1.5
EFNA3P52797 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
EFNA3P52797 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
EFNA3P52797 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
EFNA3P52797 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
EFNA3P52797 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
EFNA3P52797 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
EFNA3P52797 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
EFNA3P52797 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.65□□□□□ -1.5
EFNA3P52797 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
EFNA3P52797 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
EFNA3P52797 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.65□□□□□ -1.5
EFNA3P52797 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
EFNA3P52797 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
EFNA3P52797 RNA5SP500-201ENST00000364486 119 ntBASIC5.65□□□□□ -1.5
EFNA3P52797 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
EFNA3P52797 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.65□□□□□ -1.5
EFNA3P52797 BX284632.2-201ENST00000421091 399 ntBASIC5.65□□□□□ -1.5
EFNA3P52797 RPS3P2-201ENST00000421346 701 ntBASIC5.65□□□□□ -1.5
EFNA3P52797 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.65□□□□□ -1.5
EFNA3P52797 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.65□□□□□ -1.5
EFNA3P52797 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.65□□□□□ -1.5
EFNA3P52797 VN1R110P-201ENST00000438988 971 ntBASIC5.65□□□□□ -1.5
EFNA3P52797 AL512605.1-202ENST00000441919 381 ntBASIC5.65□□□□□ -1.5
EFNA3P52797 TRIM60P16-201ENST00000444048 694 ntBASIC5.65□□□□□ -1.5
EFNA3P52797 OR13K1P-201ENST00000444577 975 ntBASIC5.65□□□□□ -1.5
EFNA3P52797 AL359955.2-201ENST00000445380 353 ntBASIC5.65□□□□□ -1.5
EFNA3P52797 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
EFNA3P52797 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
EFNA3P52797 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.65□□□□□ -1.5
EFNA3P52797 GEMIN2P1-201ENST00000454246 752 ntBASIC5.65□□□□□ -1.5
EFNA3P52797 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.65□□□□□ -1.5
EFNA3P52797 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.65□□□□□ -1.5
EFNA3P52797 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
EFNA3P52797 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.65□□□□□ -1.5
EFNA3P52797 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.65□□□□□ -1.5
EFNA3P52797 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.65□□□□□ -1.5
EFNA3P52797 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.65□□□□□ -1.5
EFNA3P52797 SETP3-201ENST00000581726 813 ntBASIC5.65□□□□□ -1.5
EFNA3P52797 AC090236.2-201ENST00000587933 1101 ntBASIC5.65□□□□□ -1.5
EFNA3P52797 AC119403.2-201ENST00000590960 598 ntBASIC5.65□□□□□ -1.5
EFNA3P52797 AC027334.1-201ENST00000603257 310 ntBASIC5.65□□□□□ -1.5
EFNA3P52797 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.65□□□□□ -1.5
EFNA3P52797 AP001885.1-201ENST00000621658 558 ntBASIC5.65□□□□□ -1.5
EFNA3P52797 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
EFNA3P52797 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
EFNA3P52797 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
EFNA3P52797 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.65□□□□□ -1.51
EFNA3P52797 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.65□□□□□ -1.51
EFNA3P52797 AC119674.1-213ENST00000641177 1386 ntBASIC5.65□□□□□ -1.51
EFNA3P52797 RPS2P45-201ENST00000469997 2057 ntBASIC5.65□□□□□ -1.51
EFNA3P52797 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
EFNA3P52797 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
EFNA3P52797 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.65□□□□□ -1.51
EFNA3P52797 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.64□□□□□ -1.51
EFNA3P52797 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
EFNA3P52797 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
EFNA3P52797 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms