Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.45□□□□□ -1.22
MRE11P49959 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.45□□□□□ -1.22
MRE11P49959 AL390726.5-202ENST00000564800 256 ntBASIC7.45□□□□□ -1.22
MRE11P49959 GLYATL1P2-202ENST00000588046 902 ntBASIC7.45□□□□□ -1.22
MRE11P49959 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC7.45□□□□□ -1.22
MRE11P49959 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC7.45□□□□□ -1.22
MRE11P49959 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC7.45□□□□□ -1.22
MRE11P49959 AC018645.2-201ENST00000609151 472 ntBASIC7.45□□□□□ -1.22
MRE11P49959 MTCO1P1-201ENST00000624263 1081 ntBASIC7.45□□□□□ -1.22
MRE11P49959 AL356585.10-201ENST00000641883 123 ntBASIC7.45□□□□□ -1.22
MRE11P49959 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
MRE11P49959 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
MRE11P49959 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
MRE11P49959 KYNUP3-201ENST00000574386 1341 ntBASIC7.45□□□□□ -1.22
MRE11P49959 AOX3P-204ENST00000491025 2107 ntBASIC7.45□□□□□ -1.22
MRE11P49959 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
MRE11P49959 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
MRE11P49959 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
MRE11P49959 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
MRE11P49959 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
MRE11P49959 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
MRE11P49959 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
MRE11P49959 RNU6-883P-201ENST00000384597 107 ntBASIC7.44□□□□□ -1.22
MRE11P49959 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
MRE11P49959 CYCSP17-201ENST00000407870 315 ntBASIC7.44□□□□□ -1.22
MRE11P49959 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.44□□□□□ -1.22
MRE11P49959 AL354868.1-201ENST00000417077 482 ntBASIC7.44□□□□□ -1.22
MRE11P49959 MRPS21P2-201ENST00000424704 264 ntBASIC7.44□□□□□ -1.22
MRE11P49959 CR848007.2-201ENST00000424918 787 ntBASIC7.44□□□□□ -1.22
MRE11P49959 CHCHD3P1-201ENST00000425516 676 ntBASIC7.44□□□□□ -1.22
MRE11P49959 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC7.44□□□□□ -1.22
MRE11P49959 MTND2P2-201ENST00000434633 945 ntBASIC7.44□□□□□ -1.22
MRE11P49959 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
MRE11P49959 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC7.44□□□□□ -1.22
MRE11P49959 NPM1P23-201ENST00000440193 849 ntBASIC7.44□□□□□ -1.22
MRE11P49959 SEPT14P12-201ENST00000442280 560 ntBASIC7.44□□□□□ -1.22
MRE11P49959 RPS15AP29-201ENST00000445539 400 ntBASIC7.44□□□□□ -1.22
MRE11P49959 AL606517.1-201ENST00000446914 387 ntBASIC7.44□□□□□ -1.22
MRE11P49959 RPS3AP53-201ENST00000454716 778 ntBASIC7.44□□□□□ -1.22
MRE11P49959 RN7SKP198-201ENST00000459286 306 ntBASIC7.44□□□□□ -1.22
MRE11P49959 AC108751.3-201ENST00000461814 1020 ntBASIC7.44□□□□□ -1.22
MRE11P49959 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC7.44□□□□□ -1.22
MRE11P49959 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.44□□□□□ -1.22
MRE11P49959 AL035690.1-201ENST00000490892 383 ntBASIC7.44□□□□□ -1.22
MRE11P49959 RPS27P20-201ENST00000492051 246 ntBASIC7.44□□□□□ -1.22
MRE11P49959 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.44□□□□□ -1.22
MRE11P49959 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC7.44□□□□□ -1.22
MRE11P49959 CCNHP1-201ENST00000513311 678 ntBASIC7.44□□□□□ -1.22
MRE11P49959 AC008429.4-201ENST00000521201 182 ntBASIC7.44□□□□□ -1.22
MRE11P49959 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
MRE11P49959 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.44□□□□□ -1.22
MRE11P49959 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.44□□□□□ -1.22
MRE11P49959 OR1E3-201ENST00000575608 948 ntBASIC7.44□□□□□ -1.22
MRE11P49959 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC7.44□□□□□ -1.22
MRE11P49959 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC7.44□□□□□ -1.22
MRE11P49959 AP001357.1-201ENST00000586304 1053 ntBASIC7.44□□□□□ -1.22
MRE11P49959 AC025857.2-201ENST00000602711 238 ntBASIC7.44□□□□□ -1.22
MRE11P49959 AC092032.1-201ENST00000603090 165 ntBASIC7.44□□□□□ -1.22
MRE11P49959 AC096947.1-201ENST00000603233 470 ntBASIC7.44□□□□□ -1.22
MRE11P49959 AC012676.3-201ENST00000614983 479 ntBASIC7.44□□□□□ -1.22
MRE11P49959 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC7.44□□□□□ -1.22
MRE11P49959 AC004777.1-201ENST00000624317 287 ntBASIC7.44□□□□□ -1.22
MRE11P49959 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
MRE11P49959 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.44□□□□□ -1.22
MRE11P49959 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.44□□□□□ -1.22
MRE11P49959 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
MRE11P49959 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
MRE11P49959 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
MRE11P49959 GUCY1B2-204ENST00000531898 1979 ntBASIC7.44□□□□□ -1.22
MRE11P49959 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
MRE11P49959 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
MRE11P49959 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
MRE11P49959 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
MRE11P49959 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.44□□□□□ -1.22
MRE11P49959 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.44□□□□□ -1.22
MRE11P49959 AC022164.1-201ENST00000568767 2673 ntBASIC7.44□□□□□ -1.22
MRE11P49959 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
MRE11P49959 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.44□□□□□ -1.22
MRE11P49959 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
MRE11P49959 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC7.43□□□□□ -1.22
MRE11P49959 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
MRE11P49959 AC006600.2-201ENST00000624834 2506 ntBASIC7.43□□□□□ -1.22
MRE11P49959 AC099654.3-201ENST00000447087 1546 ntBASIC7.43□□□□□ -1.22
MRE11P49959 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.43□□□□□ -1.22
MRE11P49959 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC7.43□□□□□ -1.22
MRE11P49959 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
MRE11P49959 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
MRE11P49959 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.43□□□□□ -1.22
MRE11P49959 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
MRE11P49959 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
MRE11P49959 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.43□□□□□ -1.22
MRE11P49959 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.43□□□□□ -1.22
MRE11P49959 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
MRE11P49959 RBBP4P5-201ENST00000398583 1266 ntBASIC7.43□□□□□ -1.22
MRE11P49959 OR1F12-201ENST00000402365 945 ntBASIC7.43□□□□□ -1.22
MRE11P49959 CYP4F30P-202ENST00000420048 405 ntBASIC7.43□□□□□ -1.22
MRE11P49959 RPL5P2-201ENST00000429598 854 ntBASIC7.43□□□□□ -1.22
MRE11P49959 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC7.43□□□□□ -1.22
MRE11P49959 MEF2AP1-201ENST00000454867 863 ntBASIC7.43□□□□□ -1.22
MRE11P49959 Z83838.1-202ENST00000456225 839 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 216.1 ms