Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC016027.5-201ENST00000427227 210 ntBASIC6.82□□□□□ -1.32
CIITAP33076 AC115283.1-201ENST00000427353 400 ntBASIC6.82□□□□□ -1.32
CIITAP33076 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
CIITAP33076 AC013410.1-201ENST00000436223 1232 ntBASIC6.82□□□□□ -1.32
CIITAP33076 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.82□□□□□ -1.32
CIITAP33076 PCNPP2-201ENST00000441651 455 ntBASIC6.82□□□□□ -1.32
CIITAP33076 SDC4P-201ENST00000453285 601 ntBASIC6.82□□□□□ -1.32
CIITAP33076 AC117394.1-201ENST00000477323 567 ntBASIC6.82□□□□□ -1.32
CIITAP33076 AC083795.1-201ENST00000491760 320 ntBASIC6.82□□□□□ -1.32
CIITAP33076 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.82□□□□□ -1.32
CIITAP33076 RNA5SP116-201ENST00000516132 98 ntBASIC6.82□□□□□ -1.32
CIITAP33076 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CIITAP33076 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.82□□□□□ -1.32
CIITAP33076 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.82□□□□□ -1.32
CIITAP33076 AC005726.4-201ENST00000582858 458 ntBASIC6.82□□□□□ -1.32
CIITAP33076 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.82□□□□□ -1.32
CIITAP33076 AL049840.6-201ENST00000604583 345 ntBASIC6.82□□□□□ -1.32
CIITAP33076 MIR6793-201ENST00000612376 63 ntBASIC6.82□□□□□ -1.32
CIITAP33076 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.82□□□□□ -1.32
CIITAP33076 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.82□□□□□ -1.32
CIITAP33076 AF287957.1-201ENST00000607368 1595 ntBASIC6.82□□□□□ -1.32
CIITAP33076 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CIITAP33076 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CIITAP33076 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.81□□□□□ -1.32
CIITAP33076 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CIITAP33076 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.81□□□□□ -1.32
CIITAP33076 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CIITAP33076 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CIITAP33076 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CIITAP33076 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CIITAP33076 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.81□□□□□ -1.32
CIITAP33076 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.81□□□□□ -1.32
CIITAP33076 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.81□□□□□ -1.32
CIITAP33076 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.81□□□□□ -1.32
CIITAP33076 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CIITAP33076 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.81□□□□□ -1.32
CIITAP33076 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
CIITAP33076 AL360271.1-201ENST00000395679 510 ntBASIC6.81□□□□□ -1.32
CIITAP33076 SNORA81-201ENST00000408493 178 ntBASIC6.81□□□□□ -1.32
CIITAP33076 MYL6P5-201ENST00000412707 459 ntBASIC6.81□□□□□ -1.32
CIITAP33076 AL354890.1-201ENST00000413730 346 ntBASIC6.81□□□□□ -1.32
CIITAP33076 AC019070.1-201ENST00000415008 1024 ntBASIC6.81□□□□□ -1.32
CIITAP33076 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.81□□□□□ -1.32
CIITAP33076 AC066692.1-201ENST00000421721 457 ntBASIC6.81□□□□□ -1.32
CIITAP33076 NMD3P2-201ENST00000421815 761 ntBASIC6.81□□□□□ -1.32
CIITAP33076 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.81□□□□□ -1.32
CIITAP33076 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.81□□□□□ -1.32
CIITAP33076 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.81□□□□□ -1.32
CIITAP33076 NDUFA5P5-201ENST00000468361 342 ntBASIC6.81□□□□□ -1.32
CIITAP33076 CCDC11P1-201ENST00000503137 1162 ntBASIC6.81□□□□□ -1.32
CIITAP33076 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.81□□□□□ -1.32
CIITAP33076 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.81□□□□□ -1.32
CIITAP33076 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.81□□□□□ -1.32
CIITAP33076 AC060775.1-201ENST00000518241 520 ntBASIC6.81□□□□□ -1.32
CIITAP33076 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.81□□□□□ -1.32
CIITAP33076 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.81□□□□□ -1.32
CIITAP33076 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.81□□□□□ -1.32
CIITAP33076 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.81□□□□□ -1.32
CIITAP33076 AL133406.3-201ENST00000606817 541 ntBASIC6.81□□□□□ -1.32
CIITAP33076 AC100814.1-201ENST00000606963 623 ntBASIC6.81□□□□□ -1.32
CIITAP33076 AL021368.1-201ENST00000607490 540 ntBASIC6.81□□□□□ -1.32
CIITAP33076 FO681491.1-202ENST00000623392 737 ntBASIC6.81□□□□□ -1.32
CIITAP33076 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CIITAP33076 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.81□□□□□ -1.32
CIITAP33076 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.81□□□□□ -1.32
CIITAP33076 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CIITAP33076 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CIITAP33076 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.81□□□□□ -1.32
CIITAP33076 AC034229.2-201ENST00000566945 2508 ntBASIC6.81□□□□□ -1.32
CIITAP33076 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CIITAP33076 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
CIITAP33076 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.81□□□□□ -1.32
CIITAP33076 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CIITAP33076 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
CIITAP33076 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.81□□□□□ -1.32
CIITAP33076 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CIITAP33076 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CIITAP33076 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
CIITAP33076 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.8□□□□□ -1.32
CIITAP33076 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CIITAP33076 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CIITAP33076 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
CIITAP33076 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CIITAP33076 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CIITAP33076 OR10R3P-201ENST00000361688 942 ntBASIC6.8□□□□□ -1.32
CIITAP33076 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.8□□□□□ -1.32
CIITAP33076 SUGT1P2-201ENST00000379452 992 ntBASIC6.8□□□□□ -1.32
CIITAP33076 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
CIITAP33076 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CIITAP33076 BTBD7P2-201ENST00000441962 620 ntBASIC6.8□□□□□ -1.32
CIITAP33076 BMS1P10-201ENST00000443754 1120 ntBASIC6.8□□□□□ -1.32
CIITAP33076 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CIITAP33076 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC6.8□□□□□ -1.32
CIITAP33076 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.8□□□□□ -1.32
CIITAP33076 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.8□□□□□ -1.32
CIITAP33076 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.8□□□□□ -1.32
CIITAP33076 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.8□□□□□ -1.32
CIITAP33076 OR5H7P-201ENST00000514084 930 ntBASIC6.8□□□□□ -1.32
CIITAP33076 RNA5SP438-201ENST00000516561 112 ntBASIC6.8□□□□□ -1.32
CIITAP33076 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms