Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ABCD3P28288 HMGB1P3-201ENST00000502802 616 ntBASIC5.89□□□□□ -1.47
ABCD3P28288 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.89□□□□□ -1.47
ABCD3P28288 AC093816.1-201ENST00000515076 913 ntBASIC5.89□□□□□ -1.47
ABCD3P28288 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.89□□□□□ -1.47
ABCD3P28288 HMGB1P46-201ENST00000520062 610 ntBASIC5.89□□□□□ -1.47
ABCD3P28288 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.89□□□□□ -1.47
ABCD3P28288 AP003033.2-201ENST00000528901 805 ntBASIC5.89□□□□□ -1.47
ABCD3P28288 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ABCD3P28288 AC027176.2-201ENST00000559166 746 ntBASIC5.89□□□□□ -1.47
ABCD3P28288 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.89□□□□□ -1.47
ABCD3P28288 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ABCD3P28288 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.89□□□□□ -1.47
ABCD3P28288 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.89□□□□□ -1.47
ABCD3P28288 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.89□□□□□ -1.47
ABCD3P28288 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.89□□□□□ -1.47
ABCD3P28288 AL096803.3-201ENST00000609032 532 ntBASIC5.89□□□□□ -1.47
ABCD3P28288 AC019131.2-201ENST00000609071 870 ntBASIC5.89□□□□□ -1.47
ABCD3P28288 OR5AC4P-202ENST00000642086 985 ntBASIC5.89□□□□□ -1.47
ABCD3P28288 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ABCD3P28288 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.89□□□□□ -1.47
ABCD3P28288 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
ABCD3P28288 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ABCD3P28288 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
ABCD3P28288 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ABCD3P28288 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
ABCD3P28288 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ABCD3P28288 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ABCD3P28288 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ABCD3P28288 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.89□□□□□ -1.47
ABCD3P28288 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ABCD3P28288 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.88□□□□□ -1.47
ABCD3P28288 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.88□□□□□ -1.47
ABCD3P28288 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.88□□□□□ -1.47
ABCD3P28288 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.88□□□□□ -1.47
ABCD3P28288 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.88□□□□□ -1.47
ABCD3P28288 NCOA4P2-201ENST00000340589 1813 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
ABCD3P28288 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.88□□□□□ -1.47
ABCD3P28288 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ABCD3P28288 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
ABCD3P28288 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ABCD3P28288 RPL11P4-201ENST00000332269 436 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 RN7SKP250-201ENST00000363924 321 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ABCD3P28288 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.88□□□□□ -1.47
ABCD3P28288 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ABCD3P28288 U3.43-201ENST00000410734 213 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 DHFRP2-201ENST00000414224 547 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 OSTCP4-201ENST00000424397 449 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 AC023141.6-201ENST00000429418 337 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 AL451136.1-201ENST00000435399 325 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 MTCYBP29-201ENST00000436327 1006 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 LDHAP2-201ENST00000437325 985 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 SUMO2P1-206ENST00000445436 284 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.88□□□□□ -1.47
ABCD3P28288 AC097359.1-201ENST00000447946 463 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.88□□□□□ -1.47
ABCD3P28288 YRDCP3-201ENST00000456507 480 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 MTND2P30-201ENST00000456663 382 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 CABYRP1-201ENST00000465493 1045 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 RN7SL643P-201ENST00000471845 291 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 AC021087.2-201ENST00000504656 1203 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.88□□□□□ -1.47
ABCD3P28288 AC034244.2-201ENST00000514668 858 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.88□□□□□ -1.47
ABCD3P28288 IGHV1-14-201ENST00000523391 241 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.88□□□□□ -1.47
ABCD3P28288 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.88□□□□□ -1.47
ABCD3P28288 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.88□□□□□ -1.47
ABCD3P28288 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.88□□□□□ -1.47
ABCD3P28288 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.88□□□□□ -1.47
ABCD3P28288 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.88□□□□□ -1.47
ABCD3P28288 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.88□□□□□ -1.47
ABCD3P28288 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.88□□□□□ -1.47
ABCD3P28288 AC067852.5-201ENST00000589299 310 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 AC242628.1-201ENST00000606810 391 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 AL352984.2-202ENST00000613699 155 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 MIR6811-201ENST00000620409 58 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.88□□□□□ -1.47
ABCD3P28288 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.88□□□□□ -1.47
ABCD3P28288 AC010325.3-201ENST00000641084 394 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ABCD3P28288 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
ABCD3P28288 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ABCD3P28288 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.88□□□□□ -1.47
ABCD3P28288 AC009501.3-201ENST00000605001 1352 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.88□□□□□ -1.47
ABCD3P28288 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
ABCD3P28288 CASC19-246ENST00000641625 1606 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ABCD3P28288 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ABCD3P28288 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
ABCD3P28288 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.88□□□□□ -1.47
ABCD3P28288 KARSP1-201ENST00000451871 1752 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
ABCD3P28288 AL136984.1-201ENST00000607611 1893 ntBASIC5.88□□□□□ -1.47
ABCD3P28288 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ABCD3P28288 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms