Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC005393.1-201ENST00000617916 584 ntBASIC6.65□□□□□ -1.34
XPAP23025 FRG1DP-201ENST00000635586 771 ntBASIC6.65□□□□□ -1.34
XPAP23025 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
XPAP23025 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
XPAP23025 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
XPAP23025 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.65□□□□□ -1.35
XPAP23025 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
XPAP23025 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
XPAP23025 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
XPAP23025 Z83820.1-201ENST00000456978 1499 ntBASIC6.65□□□□□ -1.35
XPAP23025 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
XPAP23025 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
XPAP23025 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
XPAP23025 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.65□□□□□ -1.35
XPAP23025 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.65□□□□□ -1.35
XPAP23025 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
XPAP23025 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.65□□□□□ -1.35
XPAP23025 ASNSP6-201ENST00000592770 1618 ntBASIC6.65□□□□□ -1.35
XPAP23025 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
XPAP23025 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
XPAP23025 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.65□□□□□ -1.35
XPAP23025 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.65□□□□□ -1.35
XPAP23025 AL591848.4-201ENST00000567832 3472 ntBASIC6.64□□□□□ -1.35
XPAP23025 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
XPAP23025 MAPK10-365ENST00000641902 3825 ntBASIC6.64□□□□□ -1.35
XPAP23025 MAPK10-357ENST00000641831 2858 ntBASIC6.64□□□□□ -1.35
XPAP23025 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.64□□□□□ -1.35
XPAP23025 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
XPAP23025 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
XPAP23025 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
XPAP23025 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
XPAP23025 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
XPAP23025 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
XPAP23025 RPL24P4-201ENST00000326586 421 ntBASIC6.64□□□□□ -1.35
XPAP23025 RNU1-24P-201ENST00000364285 165 ntBASIC6.64□□□□□ -1.35
XPAP23025 RNA5SP485-201ENST00000365053 119 ntBASIC6.64□□□□□ -1.35
XPAP23025 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.64□□□□□ -1.35
XPAP23025 AC245036.1-201ENST00000391727 309 ntBASIC6.64□□□□□ -1.35
XPAP23025 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.64□□□□□ -1.35
XPAP23025 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.64□□□□□ -1.35
XPAP23025 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.64□□□□□ -1.35
XPAP23025 AC092865.3-201ENST00000425390 1026 ntBASIC6.64□□□□□ -1.35
XPAP23025 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.64□□□□□ -1.35
XPAP23025 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC6.64□□□□□ -1.35
XPAP23025 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.64□□□□□ -1.35
XPAP23025 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC6.64□□□□□ -1.35
XPAP23025 MTND6P5-201ENST00000448266 512 ntBASIC6.64□□□□□ -1.35
XPAP23025 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.64□□□□□ -1.35
XPAP23025 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.64□□□□□ -1.35
XPAP23025 BZW1P1-201ENST00000454901 1240 ntBASIC6.64□□□□□ -1.35
XPAP23025 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.64□□□□□ -1.35
XPAP23025 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.64□□□□□ -1.35
XPAP23025 RPS7P10-201ENST00000464254 603 ntBASIC6.64□□□□□ -1.35
XPAP23025 RPL5P11-201ENST00000498068 893 ntBASIC6.64□□□□□ -1.35
XPAP23025 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.64□□□□□ -1.35
XPAP23025 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
XPAP23025 AC093870.1-201ENST00000506837 213 ntBASIC6.64□□□□□ -1.35
XPAP23025 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.64□□□□□ -1.35
XPAP23025 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.64□□□□□ -1.35
XPAP23025 SNX18P25-201ENST00000510539 758 ntBASIC6.64□□□□□ -1.35
XPAP23025 AC119751.5-201ENST00000514077 770 ntBASIC6.64□□□□□ -1.35
XPAP23025 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.64□□□□□ -1.35
XPAP23025 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.64□□□□□ -1.35
XPAP23025 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.64□□□□□ -1.35
XPAP23025 AC023538.1-201ENST00000534576 736 ntBASIC6.64□□□□□ -1.35
XPAP23025 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.64□□□□□ -1.35
XPAP23025 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC6.64□□□□□ -1.35
XPAP23025 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.64□□□□□ -1.35
XPAP23025 AC138207.8-204ENST00000579588 527 ntBASIC6.64□□□□□ -1.35
XPAP23025 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.64□□□□□ -1.35
XPAP23025 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.64□□□□□ -1.35
XPAP23025 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.64□□□□□ -1.35
XPAP23025 AL589743.6-201ENST00000611025 117 ntBASIC6.64□□□□□ -1.35
XPAP23025 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.64□□□□□ -1.35
XPAP23025 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.64□□□□□ -1.35
XPAP23025 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.64□□□□□ -1.35
XPAP23025 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
XPAP23025 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.64□□□□□ -1.35
XPAP23025 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
XPAP23025 NEK2P4-201ENST00000425793 1329 ntBASIC6.64□□□□□ -1.35
XPAP23025 NEK2P2-201ENST00000438441 1338 ntBASIC6.64□□□□□ -1.35
XPAP23025 AL512310.3-201ENST00000547023 1335 ntBASIC6.64□□□□□ -1.35
XPAP23025 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.64□□□□□ -1.35
XPAP23025 AC092111.2-201ENST00000611627 1414 ntBASIC6.64□□□□□ -1.35
XPAP23025 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.64□□□□□ -1.35
XPAP23025 AC110597.1-201ENST00000562669 3176 ntBASIC6.64□□□□□ -1.35
XPAP23025 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
XPAP23025 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
XPAP23025 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
XPAP23025 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.64□□□□□ -1.35
XPAP23025 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
XPAP23025 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
XPAP23025 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
XPAP23025 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
XPAP23025 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
XPAP23025 AC140479.2-201ENST00000421567 3130 ntBASIC6.63□□□□□ -1.35
XPAP23025 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
XPAP23025 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
XPAP23025 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
XPAP23025 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms