Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AGGF1P3-201ENST00000493675 1213 ntBASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 IGHV1-14-201ENST00000523391 241 ntBASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AC011270.1-201ENST00000558606 583 ntBASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 OOSP1P2-201ENST00000579644 351 ntBASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AL356752.1-201ENST00000615844 593 ntBASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AC026124.2-201ENST00000621847 656 ntBASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 SNX18P12-201ENST00000624821 759 ntBASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AC129915.3-201ENST00000634128 948 ntBASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AC008691.1-209ENST00000642094 814 ntBASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AL359976.1-201ENST00000418655 3528 ntBASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
RAB40ALP0C0E4 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
RAB40ALP0C0E4 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RAB40ALP0C0E4 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 AC034229.2-201ENST00000566945 2508 ntBASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 RNU4-23P-201ENST00000362839 140 ntBASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 AC245096.1-201ENST00000413104 546 ntBASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 RPS7P8-201ENST00000418311 581 ntBASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 IPPKP1-201ENST00000422501 768 ntBASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 AC245884.2-201ENST00000426257 404 ntBASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 H3F3BP1-201ENST00000440551 403 ntBASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 HMGN1P8-201ENST00000463578 288 ntBASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 AC092865.4-201ENST00000477936 615 ntBASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 RN7SKP238-201ENST00000516483 249 ntBASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 RNA5SP271-201ENST00000516700 88 ntBASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 Y_RNA.710-201ENST00000516975 110 ntBASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 RNA5SP340-201ENST00000517132 107 ntBASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 IGKV3D-34-201ENST00000522638 302 ntBASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 AP005639.1-201ENST00000526939 192 ntBASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 RN7SL753P-201ENST00000581238 290 ntBASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 AC006924.1-201ENST00000610750 559 ntBASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 AC073488.3-201ENST00000631611 778 ntBASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAB40ALP0C0E4 HSPD1P8-201ENST00000400121 1658 ntBASIC5.82□□□□□ -1.48
RAB40ALP0C0E4 AC090220.1-201ENST00000593078 1699 ntBASIC5.82□□□□□ -1.48
RAB40ALP0C0E4 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RAB40ALP0C0E4 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.82□□□□□ -1.48
RAB40ALP0C0E4 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.82□□□□□ -1.48
RAB40ALP0C0E4 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.82□□□□□ -1.48
RAB40ALP0C0E4 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.82□□□□□ -1.48
RAB40ALP0C0E4 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.82□□□□□ -1.48
RAB40ALP0C0E4 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.82□□□□□ -1.48
RAB40ALP0C0E4 Z95114.1-201ENST00000624264 14574 ntBASIC5.82□□□□□ -1.48
RAB40ALP0C0E4 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RAB40ALP0C0E4 AC007159.1-201ENST00000566529 4706 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms