Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC4.54□□□□□ -1.68
CXCL1P09341 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC4.54□□□□□ -1.68
CXCL1P09341 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.54□□□□□ -1.68
CXCL1P09341 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC4.54□□□□□ -1.68
CXCL1P09341 OR8A2P-201ENST00000528631 952 ntBASIC4.54□□□□□ -1.68
CXCL1P09341 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC4.54□□□□□ -1.68
CXCL1P09341 AC092865.1-201ENST00000544395 1023 ntBASIC4.54□□□□□ -1.68
CXCL1P09341 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC4.54□□□□□ -1.68
CXCL1P09341 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.54□□□□□ -1.68
CXCL1P09341 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC4.54□□□□□ -1.68
CXCL1P09341 AF186192.2-204ENST00000581667 524 ntBASIC4.54□□□□□ -1.68
CXCL1P09341 AP005262.1-201ENST00000582646 997 ntBASIC4.54□□□□□ -1.68
CXCL1P09341 AC005332.4-201ENST00000592752 579 ntBASIC4.54□□□□□ -1.68
CXCL1P09341 RPL7AP69-201ENST00000595306 806 ntBASIC4.54□□□□□ -1.68
CXCL1P09341 AC073046.2-201ENST00000604756 527 ntBASIC4.54□□□□□ -1.68
CXCL1P09341 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC4.54□□□□□ -1.68
CXCL1P09341 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC4.54□□□□□ -1.68
CXCL1P09341 AC005514.1-201ENST00000623521 208 ntBASIC4.54□□□□□ -1.68
CXCL1P09341 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CXCL1P09341 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CXCL1P09341 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC4.54□□□□□ -1.68
CXCL1P09341 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC4.54□□□□□ -1.68
CXCL1P09341 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CXCL1P09341 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CXCL1P09341 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CXCL1P09341 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.54□□□□□ -1.68
CXCL1P09341 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.54□□□□□ -1.68
CXCL1P09341 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.54□□□□□ -1.68
CXCL1P09341 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CXCL1P09341 AC010132.4-201ENST00000569883 1368 ntBASIC4.53□□□□□ -1.68
CXCL1P09341 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.53□□□□□ -1.68
CXCL1P09341 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
CXCL1P09341 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CXCL1P09341 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.53□□□□□ -1.68
CXCL1P09341 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CXCL1P09341 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CXCL1P09341 AC079248.1-201ENST00000427568 1546 ntBASIC4.53□□□□□ -1.68
CXCL1P09341 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.53□□□□□ -1.68
CXCL1P09341 THAP12P9-201ENST00000503971 2360 ntBASIC4.53□□□□□ -1.68
CXCL1P09341 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CXCL1P09341 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CXCL1P09341 SNORD35A-201ENST00000363389 86 ntBASIC4.53□□□□□ -1.68
CXCL1P09341 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CXCL1P09341 MICG-208ENST00000416822 132 ntBASIC4.53□□□□□ -1.68
CXCL1P09341 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC4.53□□□□□ -1.68
CXCL1P09341 COL11A2P1-205ENST00000441798 676 ntBASIC4.53□□□□□ -1.68
CXCL1P09341 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC4.53□□□□□ -1.68
CXCL1P09341 AL845321.1-201ENST00000444603 348 ntBASIC4.53□□□□□ -1.68
CXCL1P09341 OR52I1-201ENST00000450052 1050 ntBASIC4.53□□□□□ -1.68
CXCL1P09341 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.53□□□□□ -1.68
CXCL1P09341 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC4.53□□□□□ -1.68
CXCL1P09341 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC4.53□□□□□ -1.68
CXCL1P09341 UCK2-205ENST00000469256 753 ntTSL 3 BASIC4.53□□□□□ -1.68
CXCL1P09341 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC4.53□□□□□ -1.68
CXCL1P09341 CCDC11P1-201ENST00000503137 1162 ntBASIC4.53□□□□□ -1.68
CXCL1P09341 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC4.53□□□□□ -1.68
CXCL1P09341 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC4.53□□□□□ -1.68
CXCL1P09341 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC4.53□□□□□ -1.68
CXCL1P09341 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.53□□□□□ -1.68
CXCL1P09341 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC4.53□□□□□ -1.68
CXCL1P09341 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC4.53□□□□□ -1.68
CXCL1P09341 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC4.53□□□□□ -1.68
CXCL1P09341 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CXCL1P09341 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC4.53□□□□□ -1.68
CXCL1P09341 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.53□□□□□ -1.68
CXCL1P09341 RN7SL131P-201ENST00000579043 256 ntBASIC4.53□□□□□ -1.68
CXCL1P09341 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CXCL1P09341 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CXCL1P09341 AC026333.4-201ENST00000613543 544 ntBASIC4.53□□□□□ -1.68
CXCL1P09341 AC010998.3-201ENST00000613871 631 ntBASIC4.53□□□□□ -1.68
CXCL1P09341 AC120036.2-201ENST00000509729 1474 ntBASIC4.53□□□□□ -1.68
CXCL1P09341 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.53□□□□□ -1.68
CXCL1P09341 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.53□□□□□ -1.68
CXCL1P09341 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.53□□□□□ -1.68
CXCL1P09341 PCAT14-202ENST00000627127 3935 ntBASIC4.53□□□□□ -1.68
CXCL1P09341 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CXCL1P09341 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CXCL1P09341 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.53□□□□□ -1.68
CXCL1P09341 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CXCL1P09341 AC104964.3-201ENST00000606115 2860 ntBASIC4.53□□□□□ -1.68
CXCL1P09341 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC4.53□□□□□ -1.68
CXCL1P09341 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CXCL1P09341 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.53□□□□□ -1.68
CXCL1P09341 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CXCL1P09341 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CXCL1P09341 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
CXCL1P09341 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
CXCL1P09341 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
CXCL1P09341 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
CXCL1P09341 HSPD1P1-201ENST00000503199 1726 ntBASIC4.52□□□□□ -1.69
CXCL1P09341 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL1P09341 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL1P09341 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL1P09341 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL1P09341 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CXCL1P09341 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL1P09341 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL1P09341 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CXCL1P09341 MYL6P5-201ENST00000412707 459 ntBASIC4.52□□□□□ -1.69
CXCL1P09341 MTND2P12-201ENST00000417560 1252 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms