Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 FBXL21-201ENST00000297158 1305 ntBASIC5.98□□□□□ -1.45
HLA-DQB2P05538 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 AC027088.4-201ENST00000611559 1947 ntBASIC5.97□□□□□ -1.45
HLA-DQB2P05538 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 RN7SKP275-201ENST00000364626 301 ntBASIC5.97□□□□□ -1.45
HLA-DQB2P05538 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.97□□□□□ -1.45
HLA-DQB2P05538 RNU2-18P-201ENST00000411224 162 ntBASIC5.97□□□□□ -1.45
HLA-DQB2P05538 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 VN1R110P-201ENST00000438988 971 ntBASIC5.97□□□□□ -1.45
HLA-DQB2P05538 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 AC004129.2-201ENST00000457229 287 ntBASIC5.97□□□□□ -1.45
HLA-DQB2P05538 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 WBP1LP3-201ENST00000523033 208 ntBASIC5.97□□□□□ -1.45
HLA-DQB2P05538 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 AC005363.1-201ENST00000530779 351 ntBASIC5.97□□□□□ -1.45
HLA-DQB2P05538 AC068305.2-201ENST00000550567 1205 ntBASIC5.97□□□□□ -1.45
HLA-DQB2P05538 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 AC145423.1-201ENST00000605712 336 ntBASIC5.97□□□□□ -1.45
HLA-DQB2P05538 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.97□□□□□ -1.45
HLA-DQB2P05538 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DQB2P05538 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.96□□□□□ -1.45
HLA-DQB2P05538 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
HLA-DQB2P05538 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HLA-DQB2P05538 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.45
HLA-DQB2P05538 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 RNA5SP500-201ENST00000364486 119 ntBASIC5.96□□□□□ -1.46
HLA-DQB2P05538 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 CXADRP1-201ENST00000398098 1095 ntBASIC5.96□□□□□ -1.46
HLA-DQB2P05538 RN7SKP240-201ENST00000410583 375 ntBASIC5.96□□□□□ -1.46
HLA-DQB2P05538 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 NDUFS5P5-201ENST00000437256 321 ntBASIC5.96□□□□□ -1.46
HLA-DQB2P05538 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 snoU109.5-201ENST00000516231 132 ntBASIC5.96□□□□□ -1.46
HLA-DQB2P05538 AC078899.1-201ENST00000521432 1185 ntBASIC5.96□□□□□ -1.46
HLA-DQB2P05538 IGLV3-30-201ENST00000524362 298 ntBASIC5.96□□□□□ -1.46
HLA-DQB2P05538 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 TOMM20P1-201ENST00000534518 427 ntBASIC5.96□□□□□ -1.46
HLA-DQB2P05538 AC006530.1-201ENST00000555980 571 ntBASIC5.96□□□□□ -1.46
HLA-DQB2P05538 AC091078.2-201ENST00000557145 559 ntBASIC5.96□□□□□ -1.46
HLA-DQB2P05538 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 AL139099.4-201ENST00000614802 114 ntBASIC5.96□□□□□ -1.46
HLA-DQB2P05538 CXADRP3-202ENST00000617265 1100 ntBASIC5.96□□□□□ -1.46
HLA-DQB2P05538 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 MFSD8-219ENST00000641228 2559 ntBASIC5.96□□□□□ -1.46
HLA-DQB2P05538 AL359955.1-201ENST00000455242 3275 ntBASIC5.96□□□□□ -1.46
HLA-DQB2P05538 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DQB2P05538 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms