Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
APOEP02649 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
APOEP02649 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
APOEP02649 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
APOEP02649 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
APOEP02649 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
APOEP02649 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.33□□□□□ -1.4
APOEP02649 ZNF101P1-201ENST00000435701 1720 ntBASIC6.33□□□□□ -1.4
APOEP02649 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
APOEP02649 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
APOEP02649 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
APOEP02649 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
APOEP02649 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
APOEP02649 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
APOEP02649 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
APOEP02649 OOSP1-201ENST00000398992 1270 ntBASIC6.33□□□□□ -1.4
APOEP02649 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.33□□□□□ -1.4
APOEP02649 SNORA11.5-201ENST00000408163 128 ntBASIC6.33□□□□□ -1.4
APOEP02649 AL096829.1-201ENST00000413677 457 ntBASIC6.33□□□□□ -1.4
APOEP02649 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.33□□□□□ -1.4
APOEP02649 RPS15AP30-201ENST00000420976 390 ntBASIC6.33□□□□□ -1.4
APOEP02649 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.33□□□□□ -1.4
APOEP02649 AC016027.5-201ENST00000427227 210 ntBASIC6.33□□□□□ -1.4
APOEP02649 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.33□□□□□ -1.4
APOEP02649 ZNF619P1-201ENST00000446539 752 ntBASIC6.33□□□□□ -1.4
APOEP02649 AC009963.4-201ENST00000448535 339 ntBASIC6.33□□□□□ -1.4
APOEP02649 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.33□□□□□ -1.4
APOEP02649 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.33□□□□□ -1.4
APOEP02649 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.33□□□□□ -1.4
APOEP02649 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.33□□□□□ -1.4
APOEP02649 PFN1P8-201ENST00000497012 543 ntBASIC6.33□□□□□ -1.4
APOEP02649 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.33□□□□□ -1.4
APOEP02649 OR56A7P-201ENST00000524865 941 ntBASIC6.33□□□□□ -1.4
APOEP02649 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
APOEP02649 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
APOEP02649 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.33□□□□□ -1.4
APOEP02649 AC008507.3-201ENST00000585753 472 ntBASIC6.33□□□□□ -1.4
APOEP02649 AC027334.1-201ENST00000603257 310 ntBASIC6.33□□□□□ -1.4
APOEP02649 AL499605.1-201ENST00000604628 403 ntBASIC6.33□□□□□ -1.4
APOEP02649 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
APOEP02649 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
APOEP02649 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
APOEP02649 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
APOEP02649 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.33□□□□□ -1.4
APOEP02649 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
APOEP02649 AC008627.1-201ENST00000517511 1704 ntBASIC6.33□□□□□ -1.4
APOEP02649 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.33□□□□□ -1.4
APOEP02649 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.33□□□□□ -1.4
APOEP02649 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.32□□□□□ -1.4
APOEP02649 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
APOEP02649 RBMY1HP-201ENST00000382759 1389 ntBASIC6.32□□□□□ -1.4
APOEP02649 AL354854.1-201ENST00000455940 1363 ntBASIC6.32□□□□□ -1.4
APOEP02649 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.32□□□□□ -1.4
APOEP02649 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
APOEP02649 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
APOEP02649 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
APOEP02649 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
APOEP02649 AL121768.1-201ENST00000613917 2544 ntBASIC6.32□□□□□ -1.4
APOEP02649 LYARP1-201ENST00000436977 1501 ntBASIC6.32□□□□□ -1.4
APOEP02649 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.32□□□□□ -1.4
APOEP02649 RNU105B-201ENST00000364478 208 ntBASIC6.32□□□□□ -1.4
APOEP02649 MIR130B-202ENST00000385018 82 ntBASIC6.32□□□□□ -1.4
APOEP02649 RAB5CP1-201ENST00000395972 580 ntBASIC6.32□□□□□ -1.4
APOEP02649 AC245096.1-201ENST00000413104 546 ntBASIC6.32□□□□□ -1.4
APOEP02649 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.32□□□□□ -1.4
APOEP02649 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.32□□□□□ -1.4
APOEP02649 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.32□□□□□ -1.4
APOEP02649 SUMO2P8-201ENST00000434672 286 ntBASIC6.32□□□□□ -1.4
APOEP02649 RPL23AP60-201ENST00000450011 454 ntBASIC6.32□□□□□ -1.4
APOEP02649 AC016027.4-201ENST00000450866 277 ntBASIC6.32□□□□□ -1.4
APOEP02649 PPIAP27-201ENST00000453800 265 ntBASIC6.32□□□□□ -1.4
APOEP02649 AC023194.2-201ENST00000465398 406 ntBASIC6.32□□□□□ -1.4
APOEP02649 RN7SL352P-201ENST00000466002 277 ntBASIC6.32□□□□□ -1.4
APOEP02649 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.32□□□□□ -1.4
APOEP02649 AC008945.1-201ENST00000505144 499 ntBASIC6.32□□□□□ -1.4
APOEP02649 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.32□□□□□ -1.4
APOEP02649 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.32□□□□□ -1.4
APOEP02649 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.32□□□□□ -1.4
APOEP02649 IGKV3D-25-201ENST00000519599 235 ntBASIC6.32□□□□□ -1.4
APOEP02649 AC008429.4-201ENST00000521201 182 ntBASIC6.32□□□□□ -1.4
APOEP02649 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
APOEP02649 AP003396.4-201ENST00000527574 265 ntBASIC6.32□□□□□ -1.4
APOEP02649 BCAS2P1-201ENST00000528022 632 ntBASIC6.32□□□□□ -1.4
APOEP02649 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.32□□□□□ -1.4
APOEP02649 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.32□□□□□ -1.4
APOEP02649 CYCSP38-201ENST00000559840 322 ntBASIC6.32□□□□□ -1.4
APOEP02649 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.32□□□□□ -1.4
APOEP02649 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.32□□□□□ -1.4
APOEP02649 AC134669.1-201ENST00000581275 672 ntBASIC6.32□□□□□ -1.4
APOEP02649 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.32□□□□□ -1.4
APOEP02649 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.32□□□□□ -1.4
APOEP02649 AC068768.2-201ENST00000602352 343 ntBASIC6.32□□□□□ -1.4
APOEP02649 AC079315.1-201ENST00000602952 623 ntBASIC6.32□□□□□ -1.4
APOEP02649 AC245014.3-201ENST00000618589 347 ntBASIC6.32□□□□□ -1.4
APOEP02649 AC073488.3-201ENST00000631611 778 ntBASIC6.32□□□□□ -1.4
APOEP02649 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
APOEP02649 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
APOEP02649 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
APOEP02649 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.32□□□□□ -1.4
APOEP02649 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms