Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC5.51□□□□□ -1.53
SPTA1P02549 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SPTA1P02549 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SPTA1P02549 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SPTA1P02549 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SPTA1P02549 AL355375.1-201ENST00000405686 392 ntBASIC5.5□□□□□ -1.53
SPTA1P02549 NME1P1-201ENST00000420914 382 ntBASIC5.5□□□□□ -1.53
SPTA1P02549 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.5□□□□□ -1.53
SPTA1P02549 AL663074.2-201ENST00000440621 479 ntBASIC5.5□□□□□ -1.53
SPTA1P02549 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SPTA1P02549 AL161722.1-201ENST00000446972 1032 ntBASIC5.5□□□□□ -1.53
SPTA1P02549 OR2AO1P-201ENST00000476497 403 ntBASIC5.5□□□□□ -1.53
SPTA1P02549 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.5□□□□□ -1.53
SPTA1P02549 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.5□□□□□ -1.53
SPTA1P02549 BRD9P1-201ENST00000529855 560 ntBASIC5.5□□□□□ -1.53
SPTA1P02549 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SPTA1P02549 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.5□□□□□ -1.53
SPTA1P02549 OR7A1P-202ENST00000641542 1158 ntBASIC5.5□□□□□ -1.53
SPTA1P02549 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SPTA1P02549 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SPTA1P02549 YES1P1-201ENST00000418510 1628 ntBASIC5.5□□□□□ -1.53
SPTA1P02549 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC5.5□□□□□ -1.53
SPTA1P02549 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.5□□□□□ -1.53
SPTA1P02549 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SPTA1P02549 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
SPTA1P02549 XRCC6P5-201ENST00000435236 1795 ntBASIC5.5□□□□□ -1.53
SPTA1P02549 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SPTA1P02549 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC5.5□□□□□ -1.53
SPTA1P02549 AC011447.6-201ENST00000623510 2598 ntBASIC5.5□□□□□ -1.53
SPTA1P02549 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC5.5□□□□□ -1.53
SPTA1P02549 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC5.5□□□□□ -1.53
SPTA1P02549 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.5□□□□□ -1.53
SPTA1P02549 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SPTA1P02549 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.5□□□□□ -1.53
SPTA1P02549 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.5□□□□□ -1.53
SPTA1P02549 RPS11P7-201ENST00000442125 465 ntBASIC5.5□□□□□ -1.53
SPTA1P02549 SIAH1P1-201ENST00000479411 923 ntBASIC5.5□□□□□ -1.53
SPTA1P02549 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.5□□□□□ -1.53
SPTA1P02549 RPA2P3-201ENST00000533268 770 ntBASIC5.5□□□□□ -1.53
SPTA1P02549 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.5□□□□□ -1.53
SPTA1P02549 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.5□□□□□ -1.53
SPTA1P02549 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.5□□□□□ -1.53
SPTA1P02549 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.5□□□□□ -1.53
SPTA1P02549 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.5□□□□□ -1.53
SPTA1P02549 AC062022.1-201ENST00000451026 1684 ntBASIC5.5□□□□□ -1.53
SPTA1P02549 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SPTA1P02549 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.5□□□□□ -1.53
SPTA1P02549 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SPTA1P02549 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
SPTA1P02549 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.5□□□□□ -1.53
SPTA1P02549 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SPTA1P02549 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SPTA1P02549 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SPTA1P02549 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SPTA1P02549 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SPTA1P02549 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SPTA1P02549 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SPTA1P02549 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SPTA1P02549 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SPTA1P02549 SELENOWP1-201ENST00000322792 252 ntBASIC5.49□□□□□ -1.53
SPTA1P02549 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SPTA1P02549 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SPTA1P02549 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.49□□□□□ -1.53
SPTA1P02549 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.49□□□□□ -1.53
SPTA1P02549 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.49□□□□□ -1.53
SPTA1P02549 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.49□□□□□ -1.53
SPTA1P02549 Z84478.1-201ENST00000438230 1219 ntBASIC5.49□□□□□ -1.53
SPTA1P02549 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.49□□□□□ -1.53
SPTA1P02549 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.49□□□□□ -1.53
SPTA1P02549 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.49□□□□□ -1.53
SPTA1P02549 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.49□□□□□ -1.53
SPTA1P02549 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.49□□□□□ -1.53
SPTA1P02549 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.49□□□□□ -1.53
SPTA1P02549 AC022919.1-201ENST00000624979 626 ntBASIC5.49□□□□□ -1.53
SPTA1P02549 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.49□□□□□ -1.53
SPTA1P02549 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
SPTA1P02549 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SPTA1P02549 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SPTA1P02549 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
SPTA1P02549 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
SPTA1P02549 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SPTA1P02549 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.49□□□□□ -1.53
SPTA1P02549 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
SPTA1P02549 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SPTA1P02549 MAPK10-365ENST00000641902 3825 ntBASIC5.49□□□□□ -1.53
SPTA1P02549 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.49□□□□□ -1.53
SPTA1P02549 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SPTA1P02549 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SPTA1P02549 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.49□□□□□ -1.53
SPTA1P02549 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.49□□□□□ -1.53
SPTA1P02549 AL662874.1-201ENST00000426065 230 ntBASIC5.49□□□□□ -1.53
SPTA1P02549 AL034399.1-201ENST00000451535 380 ntBASIC5.49□□□□□ -1.53
SPTA1P02549 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.49□□□□□ -1.53
SPTA1P02549 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.49□□□□□ -1.53
SPTA1P02549 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.49□□□□□ -1.53
SPTA1P02549 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.49□□□□□ -1.53
SPTA1P02549 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.49□□□□□ -1.53
SPTA1P02549 AL049779.2-201ENST00000553847 315 ntBASIC5.49□□□□□ -1.53
SPTA1P02549 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.49□□□□□ -1.53
SPTA1P02549 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms