Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFBP01127 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
PDGFBP01127 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFBP01127 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
PDGFBP01127 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.18□□□□□ -1.42
PDGFBP01127 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFBP01127 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFBP01127 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
PDGFBP01127 SNORA81-201ENST00000408493 178 ntBASIC6.18□□□□□ -1.42
PDGFBP01127 RN7SKP125-201ENST00000410481 302 ntBASIC6.18□□□□□ -1.42
PDGFBP01127 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.18□□□□□ -1.42
PDGFBP01127 OR6E1P-201ENST00000414424 923 ntBASIC6.18□□□□□ -1.42
PDGFBP01127 AL596448.1-201ENST00000415024 392 ntBASIC6.18□□□□□ -1.42
PDGFBP01127 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.18□□□□□ -1.42
PDGFBP01127 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.18□□□□□ -1.42
PDGFBP01127 FMO7P-201ENST00000436045 768 ntBASIC6.18□□□□□ -1.42
PDGFBP01127 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.18□□□□□ -1.42
PDGFBP01127 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.18□□□□□ -1.42
PDGFBP01127 RN7SL72P-201ENST00000460697 269 ntBASIC6.18□□□□□ -1.42
PDGFBP01127 CBX1P5-201ENST00000475330 559 ntBASIC6.18□□□□□ -1.42
PDGFBP01127 RN7SL30P-201ENST00000488416 306 ntBASIC6.18□□□□□ -1.42
PDGFBP01127 RN7SL57P-201ENST00000493687 290 ntBASIC6.18□□□□□ -1.42
PDGFBP01127 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.18□□□□□ -1.42
PDGFBP01127 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.18□□□□□ -1.42
PDGFBP01127 IGHV3-57-201ENST00000520143 280 ntBASIC6.18□□□□□ -1.42
PDGFBP01127 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.18□□□□□ -1.42
PDGFBP01127 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.18□□□□□ -1.42
PDGFBP01127 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.18□□□□□ -1.42
PDGFBP01127 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.18□□□□□ -1.42
PDGFBP01127 PRELID3BP3-201ENST00000584963 545 ntBASIC6.18□□□□□ -1.42
PDGFBP01127 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.18□□□□□ -1.42
PDGFBP01127 AC012557.1-201ENST00000607115 611 ntBASIC6.18□□□□□ -1.42
PDGFBP01127 AL353684.1-201ENST00000622677 1120 ntBASIC6.18□□□□□ -1.42
PDGFBP01127 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.18□□□□□ -1.42
PDGFBP01127 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFBP01127 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFBP01127 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFBP01127 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFBP01127 OFD1P17-201ENST00000437639 3018 ntBASIC6.18□□□□□ -1.42
PDGFBP01127 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFBP01127 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFBP01127 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
PDGFBP01127 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.18□□□□□ -1.42
PDGFBP01127 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PDGFBP01127 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.18□□□□□ -1.42
PDGFBP01127 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFBP01127 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFBP01127 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PDGFBP01127 NCOA4P3-201ENST00000513203 1877 ntBASIC6.17□□□□□ -1.42
PDGFBP01127 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFBP01127 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.17□□□□□ -1.42
PDGFBP01127 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.17□□□□□ -1.42
PDGFBP01127 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFBP01127 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFBP01127 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
PDGFBP01127 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFBP01127 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFBP01127 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.17□□□□□ -1.42
PDGFBP01127 NACAP7-201ENST00000407371 609 ntBASIC6.17□□□□□ -1.42
PDGFBP01127 RN7SKP279-201ENST00000411383 298 ntBASIC6.17□□□□□ -1.42
PDGFBP01127 FABP7P2-201ENST00000429946 379 ntBASIC6.17□□□□□ -1.42
PDGFBP01127 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.17□□□□□ -1.42
PDGFBP01127 GAPDHP23-201ENST00000444823 993 ntBASIC6.17□□□□□ -1.42
PDGFBP01127 LRRC37A14P-201ENST00000452297 462 ntBASIC6.17□□□□□ -1.42
PDGFBP01127 RANP2-201ENST00000456833 229 ntBASIC6.17□□□□□ -1.42
PDGFBP01127 RPS23P6-201ENST00000466136 431 ntBASIC6.17□□□□□ -1.42
PDGFBP01127 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.17□□□□□ -1.42
PDGFBP01127 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.17□□□□□ -1.42
PDGFBP01127 RNA5SP228-201ENST00000516232 133 ntBASIC6.17□□□□□ -1.42
PDGFBP01127 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.17□□□□□ -1.42
PDGFBP01127 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
PDGFBP01127 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC6.17□□□□□ -1.42
PDGFBP01127 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.17□□□□□ -1.42
PDGFBP01127 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.17□□□□□ -1.42
PDGFBP01127 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.17□□□□□ -1.42
PDGFBP01127 ADAM3B-201ENST00000569937 840 ntBASIC6.17□□□□□ -1.42
PDGFBP01127 AC005899.7-201ENST00000618199 588 ntBASIC6.17□□□□□ -1.42
PDGFBP01127 CU639417.4-201ENST00000623928 207 ntBASIC6.17□□□□□ -1.42
PDGFBP01127 AC009950.2-201ENST00000636548 183 ntBASIC6.17□□□□□ -1.42
PDGFBP01127 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.17□□□□□ -1.42
PDGFBP01127 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFBP01127 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFBP01127 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.17□□□□□ -1.42
PDGFBP01127 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.17□□□□□ -1.42
PDGFBP01127 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFBP01127 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
PDGFBP01127 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PDGFBP01127 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
PDGFBP01127 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.17□□□□□ -1.42
PDGFBP01127 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFBP01127 GNL2P1-201ENST00000451274 2190 ntBASIC6.17□□□□□ -1.42
PDGFBP01127 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.17□□□□□ -1.42
PDGFBP01127 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFBP01127 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
PDGFBP01127 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDGFBP01127 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDGFBP01127 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDGFBP01127 CUBNP3-201ENST00000457461 1784 ntBASIC6.16□□□□□ -1.42
PDGFBP01127 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.16□□□□□ -1.42
PDGFBP01127 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms