Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HCN1O60741 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.49
HCN1O60741 AC020656.2-201ENST00000613291 5309 ntBASIC5.71□□□□□ -1.49
HCN1O60741 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HCN1O60741 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HCN1O60741 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HCN1O60741 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HCN1O60741 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HCN1O60741 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
HCN1O60741 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.71□□□□□ -1.5
HCN1O60741 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.71□□□□□ -1.5
HCN1O60741 RN7SKP151-201ENST00000410230 316 ntBASIC5.71□□□□□ -1.5
HCN1O60741 RN7SKP17-201ENST00000411242 351 ntBASIC5.71□□□□□ -1.5
HCN1O60741 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.71□□□□□ -1.5
HCN1O60741 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.71□□□□□ -1.5
HCN1O60741 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.71□□□□□ -1.5
HCN1O60741 AC016027.5-201ENST00000427227 210 ntBASIC5.71□□□□□ -1.5
HCN1O60741 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HCN1O60741 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.71□□□□□ -1.5
HCN1O60741 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.71□□□□□ -1.5
HCN1O60741 RPL6P30-201ENST00000443382 862 ntBASIC5.71□□□□□ -1.5
HCN1O60741 AC097463.1-201ENST00000447288 481 ntBASIC5.71□□□□□ -1.5
HCN1O60741 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.71□□□□□ -1.5
HCN1O60741 AC090589.1-201ENST00000473109 362 ntBASIC5.71□□□□□ -1.5
HCN1O60741 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.71□□□□□ -1.5
HCN1O60741 SNX18P24-201ENST00000505249 671 ntBASIC5.71□□□□□ -1.5
HCN1O60741 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.71□□□□□ -1.5
HCN1O60741 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.71□□□□□ -1.5
HCN1O60741 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HCN1O60741 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.71□□□□□ -1.5
HCN1O60741 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.71□□□□□ -1.5
HCN1O60741 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.71□□□□□ -1.5
HCN1O60741 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.71□□□□□ -1.5
HCN1O60741 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.71□□□□□ -1.5
HCN1O60741 MIR4701-201ENST00000583094 63 ntBASIC5.71□□□□□ -1.5
HCN1O60741 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.71□□□□□ -1.5
HCN1O60741 AC006924.1-201ENST00000610750 559 ntBASIC5.71□□□□□ -1.5
HCN1O60741 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.71□□□□□ -1.5
HCN1O60741 AL080312.2-201ENST00000613001 630 ntBASIC5.71□□□□□ -1.5
HCN1O60741 FAM27E2-201ENST00000619668 403 ntBASIC5.71□□□□□ -1.5
HCN1O60741 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.71□□□□□ -1.5
HCN1O60741 AC003992.1-201ENST00000635364 557 ntBASIC5.71□□□□□ -1.5
HCN1O60741 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HCN1O60741 AC096921.2-201ENST00000561507 1916 ntBASIC5.71□□□□□ -1.5
HCN1O60741 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HCN1O60741 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HCN1O60741 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.71□□□□□ -1.5
HCN1O60741 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HCN1O60741 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HCN1O60741 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
HCN1O60741 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HCN1O60741 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HCN1O60741 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.7□□□□□ -1.5
HCN1O60741 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HCN1O60741 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.7□□□□□ -1.5
HCN1O60741 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HCN1O60741 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.7□□□□□ -1.5
HCN1O60741 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HCN1O60741 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.7□□□□□ -1.5
HCN1O60741 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HCN1O60741 TRAV35-201ENST00000390462 330 ntBASIC5.7□□□□□ -1.5
HCN1O60741 OR7E156P-201ENST00000400303 464 ntBASIC5.7□□□□□ -1.5
HCN1O60741 RNU6-233P-201ENST00000410845 141 ntBASIC5.7□□□□□ -1.5
HCN1O60741 RN7SKP108-201ENST00000411367 328 ntBASIC5.7□□□□□ -1.5
HCN1O60741 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.7□□□□□ -1.5
HCN1O60741 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.7□□□□□ -1.5
HCN1O60741 AC092651.1-201ENST00000426110 312 ntBASIC5.7□□□□□ -1.5
HCN1O60741 RPL12P16-201ENST00000431098 498 ntBASIC5.7□□□□□ -1.5
HCN1O60741 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HCN1O60741 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HCN1O60741 AL590004.3-202ENST00000445883 451 ntBASIC5.7□□□□□ -1.5
HCN1O60741 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.7□□□□□ -1.5
HCN1O60741 AL445687.2-201ENST00000458156 728 ntBASIC5.7□□□□□ -1.5
HCN1O60741 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.7□□□□□ -1.5
HCN1O60741 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.7□□□□□ -1.5
HCN1O60741 PRMT5P1-201ENST00000514351 598 ntBASIC5.7□□□□□ -1.5
HCN1O60741 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HCN1O60741 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.7□□□□□ -1.5
HCN1O60741 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.7□□□□□ -1.5
HCN1O60741 RPA2P3-201ENST00000533268 770 ntBASIC5.7□□□□□ -1.5
HCN1O60741 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.7□□□□□ -1.5
HCN1O60741 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.7□□□□□ -1.5
HCN1O60741 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.7□□□□□ -1.5
HCN1O60741 AP005136.2-201ENST00000583253 1049 ntBASIC5.7□□□□□ -1.5
HCN1O60741 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.7□□□□□ -1.5
HCN1O60741 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.7□□□□□ -1.5
HCN1O60741 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.7□□□□□ -1.5
HCN1O60741 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.7□□□□□ -1.5
HCN1O60741 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.7□□□□□ -1.5
HCN1O60741 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.7□□□□□ -1.5
HCN1O60741 MIR6861-201ENST00000618657 64 ntBASIC5.7□□□□□ -1.5
HCN1O60741 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.7□□□□□ -1.5
HCN1O60741 AC000095.2-202ENST00000637415 154 ntBASIC5.7□□□□□ -1.5
HCN1O60741 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HCN1O60741 AL355488.2-201ENST00000609909 2850 ntBASIC5.7□□□□□ -1.5
HCN1O60741 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.7□□□□□ -1.5
HCN1O60741 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HCN1O60741 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HCN1O60741 AC087516.1-201ENST00000561236 2428 ntBASIC5.69□□□□□ -1.5
HCN1O60741 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms