Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 NF1P2-201ENST00000556855 2505 ntBASIC7.52□□□□□ -1.21
SOX1O00570 OR2A20P-201ENST00000479887 2913 ntBASIC7.52□□□□□ -1.21
SOX1O00570 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SOX1O00570 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
SOX1O00570 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SOX1O00570 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.52□□□□□ -1.21
SOX1O00570 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SOX1O00570 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
SOX1O00570 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SOX1O00570 OR10AB1P-202ENST00000641219 1686 ntBASIC7.52□□□□□ -1.21
SOX1O00570 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SOX1O00570 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SOX1O00570 RNU6-1331P-201ENST00000363658 106 ntBASIC7.52□□□□□ -1.21
SOX1O00570 RNA5SP485-201ENST00000365053 119 ntBASIC7.52□□□□□ -1.21
SOX1O00570 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SOX1O00570 ERHP2-201ENST00000402323 299 ntBASIC7.52□□□□□ -1.21
SOX1O00570 AL663109.1-201ENST00000411498 844 ntBASIC7.52□□□□□ -1.21
SOX1O00570 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.52□□□□□ -1.21
SOX1O00570 AL593856.1-201ENST00000419949 805 ntBASIC7.52□□□□□ -1.21
SOX1O00570 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC7.52□□□□□ -1.21
SOX1O00570 AC004074.1-201ENST00000421810 1063 ntBASIC7.52□□□□□ -1.21
SOX1O00570 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC7.52□□□□□ -1.21
SOX1O00570 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.52□□□□□ -1.21
SOX1O00570 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7.52□□□□□ -1.21
SOX1O00570 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC7.52□□□□□ -1.21
SOX1O00570 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC7.52□□□□□ -1.21
SOX1O00570 Z74696.2-201ENST00000436514 498 ntBASIC7.52□□□□□ -1.21
SOX1O00570 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SOX1O00570 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC7.52□□□□□ -1.21
SOX1O00570 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC7.52□□□□□ -1.21
SOX1O00570 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC7.52□□□□□ -1.21
SOX1O00570 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.52□□□□□ -1.21
SOX1O00570 SEPT14P24-201ENST00000447236 180 ntBASIC7.52□□□□□ -1.21
SOX1O00570 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC7.52□□□□□ -1.21
SOX1O00570 AC068724.1-201ENST00000487100 792 ntBASIC7.52□□□□□ -1.21
SOX1O00570 MTAPP1-201ENST00000489154 819 ntBASIC7.52□□□□□ -1.21
SOX1O00570 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC7.52□□□□□ -1.21
SOX1O00570 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.52□□□□□ -1.21
SOX1O00570 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC7.52□□□□□ -1.21
SOX1O00570 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC7.52□□□□□ -1.21
SOX1O00570 AC135983.3-201ENST00000528049 1226 ntBASIC7.52□□□□□ -1.21
SOX1O00570 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC7.52□□□□□ -1.21
SOX1O00570 AC026458.1-201ENST00000564330 438 ntBASIC7.52□□□□□ -1.21
SOX1O00570 AC074051.3-201ENST00000570238 358 ntBASIC7.52□□□□□ -1.21
SOX1O00570 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.52□□□□□ -1.21
SOX1O00570 AL049840.6-201ENST00000604583 345 ntBASIC7.52□□□□□ -1.21
SOX1O00570 AP004372.1-201ENST00000604842 844 ntBASIC7.52□□□□□ -1.21
SOX1O00570 AF250324.2-201ENST00000608299 610 ntBASIC7.52□□□□□ -1.21
SOX1O00570 AC009237.15-201ENST00000610252 501 ntBASIC7.52□□□□□ -1.21
SOX1O00570 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SOX1O00570 AC108451.1-201ENST00000558208 2520 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SOX1O00570 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC7.52□□□□□ -1.21
SOX1O00570 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC7.52□□□□□ -1.21
SOX1O00570 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
SOX1O00570 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC7.52□□□□□ -1.21
SOX1O00570 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
SOX1O00570 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SOX1O00570 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
SOX1O00570 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
SOX1O00570 GPI-202ENST00000415930 4000 ntTSL 2 BASIC7.52□□□□□ -1.21
SOX1O00570 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SOX1O00570 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC7.52□□□□□ -1.21
SOX1O00570 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
SOX1O00570 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SOX1O00570 WNK1-220ENST00000574564 1401 ntBASIC7.52□□□□□ -1.21
SOX1O00570 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.52□□□□□ -1.21
SOX1O00570 AC011379.1-201ENST00000508713 3025 ntBASIC7.52□□□□□ -1.21
SOX1O00570 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SOX1O00570 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SOX1O00570 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
SOX1O00570 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SOX1O00570 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC7.51□□□□□ -1.21
SOX1O00570 DDX43P1-201ENST00000510713 1763 ntBASIC7.51□□□□□ -1.21
SOX1O00570 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.51□□□□□ -1.21
SOX1O00570 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC7.51□□□□□ -1.21
SOX1O00570 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
SOX1O00570 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
SOX1O00570 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC7.51□□□□□ -1.21
SOX1O00570 NCLP2-201ENST00000416078 1462 ntBASIC7.51□□□□□ -1.21
SOX1O00570 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
SOX1O00570 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.51□□□□□ -1.21
SOX1O00570 SNORD116.1-201ENST00000365628 92 ntBASIC7.51□□□□□ -1.21
SOX1O00570 Y_RNA.553-201ENST00000384670 102 ntBASIC7.51□□□□□ -1.21
SOX1O00570 CAPNS1P1-201ENST00000401029 633 ntBASIC7.51□□□□□ -1.21
SOX1O00570 RNU2-17P-201ENST00000410290 190 ntBASIC7.51□□□□□ -1.21
SOX1O00570 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.51□□□□□ -1.21
SOX1O00570 RPS7P9-201ENST00000414704 586 ntBASIC7.51□□□□□ -1.21
SOX1O00570 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC7.51□□□□□ -1.21
SOX1O00570 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC7.51□□□□□ -1.21
SOX1O00570 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC7.51□□□□□ -1.21
SOX1O00570 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.51□□□□□ -1.21
SOX1O00570 RPL23AP19-201ENST00000436229 369 ntBASIC7.51□□□□□ -1.21
SOX1O00570 YWHAZP7-201ENST00000436906 631 ntBASIC7.51□□□□□ -1.21
SOX1O00570 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.51□□□□□ -1.21
SOX1O00570 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SOX1O00570 RN7SL515P-201ENST00000463999 297 ntBASIC7.51□□□□□ -1.21
SOX1O00570 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC7.51□□□□□ -1.21
SOX1O00570 RPL23AP8-201ENST00000479812 475 ntBASIC7.51□□□□□ -1.21
SOX1O00570 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.51□□□□□ -1.21
SOX1O00570 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms