Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC021269.1-201ENST00000526860 705 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.02□□□□□ -1.61
SDCBPO00560 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.02□□□□□ -1.61
SDCBPO00560 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.02□□□□□ -1.61
SDCBPO00560 NPM1P5-201ENST00000557228 838 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 AC007346.2-201ENST00000564816 892 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.02□□□□□ -1.61
SDCBPO00560 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.02□□□□□ -1.61
SDCBPO00560 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.02□□□□□ -1.61
SDCBPO00560 RN7SL230P-201ENST00000580835 303 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 AP005136.2-201ENST00000583253 1049 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 RFPL4AP6-201ENST00000616792 846 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.02□□□□□ -1.61
SDCBPO00560 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.02□□□□□ -1.61
SDCBPO00560 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
SDCBPO00560 AC130304.1-201ENST00000622942 2385 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SDCBPO00560 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SDCBPO00560 AC119674.1-202ENST00000641333 1860 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 AC232271.1-201ENST00000602455 2715 ntBASIC5.02□□□□□ -1.61
SDCBPO00560 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
SDCBPO00560 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SDCBPO00560 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SDCBPO00560 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SDCBPO00560 AC109446.4-201ENST00000623235 2755 ntBASIC5.01□□□□□ -1.61
SDCBPO00560 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.01□□□□□ -1.61
SDCBPO00560 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SDCBPO00560 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
SDCBPO00560 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SDCBPO00560 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SDCBPO00560 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SDCBPO00560 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SDCBPO00560 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SDCBPO00560 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.01□□□□□ -1.61
SDCBPO00560 MIR188-201ENST00000385034 86 ntBASIC5.01□□□□□ -1.61
SDCBPO00560 AL132875.1-201ENST00000403623 949 ntBASIC5.01□□□□□ -1.61
SDCBPO00560 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SDCBPO00560 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SDCBPO00560 RPS15AP30-201ENST00000420976 390 ntBASIC5.01□□□□□ -1.61
SDCBPO00560 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.01□□□□□ -1.61
SDCBPO00560 RPSAP32-201ENST00000432681 526 ntBASIC5.01□□□□□ -1.61
SDCBPO00560 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.01□□□□□ -1.61
SDCBPO00560 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SDCBPO00560 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.01□□□□□ -1.61
SDCBPO00560 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SDCBPO00560 KF459542.1-201ENST00000450908 553 ntBASIC5.01□□□□□ -1.61
SDCBPO00560 SDC4P-201ENST00000453285 601 ntBASIC5.01□□□□□ -1.61
SDCBPO00560 RPL12P39-201ENST00000455456 496 ntBASIC5.01□□□□□ -1.61
SDCBPO00560 Z83838.1-202ENST00000456225 839 ntBASIC5.01□□□□□ -1.61
SDCBPO00560 OR7E22P-201ENST00000478335 1035 ntBASIC5.01□□□□□ -1.61
SDCBPO00560 AC044810.1-201ENST00000480271 711 ntBASIC5.01□□□□□ -1.61
SDCBPO00560 AC113367.2-201ENST00000505749 160 ntBASIC5.01□□□□□ -1.61
SDCBPO00560 ZNF519P4-201ENST00000514008 125 ntBASIC5.01□□□□□ -1.61
SDCBPO00560 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SDCBPO00560 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.01□□□□□ -1.61
SDCBPO00560 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.01□□□□□ -1.61
SDCBPO00560 AC090826.1-203ENST00000569235 490 ntBASIC5.01□□□□□ -1.61
SDCBPO00560 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.01□□□□□ -1.61
SDCBPO00560 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.01□□□□□ -1.61
SDCBPO00560 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.01□□□□□ -1.61
SDCBPO00560 AC119403.2-201ENST00000590960 598 ntBASIC5.01□□□□□ -1.61
SDCBPO00560 AL133481.2-203ENST00000607558 139 ntBASIC5.01□□□□□ -1.61
SDCBPO00560 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.01□□□□□ -1.61
SDCBPO00560 AC005899.7-201ENST00000618199 588 ntBASIC5.01□□□□□ -1.61
SDCBPO00560 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.01□□□□□ -1.61
SDCBPO00560 AC079776.5-201ENST00000641920 211 ntBASIC5.01□□□□□ -1.61
SDCBPO00560 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SDCBPO00560 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SDCBPO00560 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SDCBPO00560 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.01□□□□□ -1.61
SDCBPO00560 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SDCBPO00560 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SDCBPO00560 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SDCBPO00560 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SDCBPO00560 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SDCBPO00560 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
SDCBPO00560 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SDCBPO00560 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SDCBPO00560 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SDCBPO00560 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5□□□□□ -1.61
SDCBPO00560 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
SDCBPO00560 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5□□□□□ -1.61
SDCBPO00560 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5□□□□□ -1.61
SDCBPO00560 AL355488.2-201ENST00000609909 2850 ntBASIC5□□□□□ -1.61
SDCBPO00560 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5□□□□□ -1.61
SDCBPO00560 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
SDCBPO00560 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5□□□□□ -1.61
SDCBPO00560 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SDCBPO00560 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5□□□□□ -1.61
SDCBPO00560 RNU105B-201ENST00000364478 208 ntBASIC5□□□□□ -1.61
SDCBPO00560 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5□□□□□ -1.61
SDCBPO00560 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
SDCBPO00560 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SDCBPO00560 AL096829.1-201ENST00000413677 457 ntBASIC5□□□□□ -1.61
SDCBPO00560 RPL7AP51-201ENST00000422016 760 ntBASIC5□□□□□ -1.61
SDCBPO00560 RPL12P12-201ENST00000424633 501 ntBASIC5□□□□□ -1.61
SDCBPO00560 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5□□□□□ -1.61
SDCBPO00560 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5□□□□□ -1.61
SDCBPO00560 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms