Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.62□□□□□ -1.51
UPK1AO00322 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.62□□□□□ -1.51
UPK1AO00322 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.62□□□□□ -1.51
UPK1AO00322 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.62□□□□□ -1.51
UPK1AO00322 AC002519.2-203ENST00000567043 837 ntBASIC5.62□□□□□ -1.51
UPK1AO00322 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
UPK1AO00322 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.62□□□□□ -1.51
UPK1AO00322 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.62□□□□□ -1.51
UPK1AO00322 AC068768.2-201ENST00000602352 343 ntBASIC5.62□□□□□ -1.51
UPK1AO00322 AC124916.2-201ENST00000604416 224 ntBASIC5.62□□□□□ -1.51
UPK1AO00322 AC092681.3-201ENST00000609463 678 ntBASIC5.62□□□□□ -1.51
UPK1AO00322 AC048341.3-201ENST00000619323 491 ntBASIC5.62□□□□□ -1.51
UPK1AO00322 FAM27E2-201ENST00000619668 403 ntBASIC5.62□□□□□ -1.51
UPK1AO00322 AC096708.4-201ENST00000620563 552 ntBASIC5.62□□□□□ -1.51
UPK1AO00322 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.62□□□□□ -1.51
UPK1AO00322 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.62□□□□□ -1.51
UPK1AO00322 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
UPK1AO00322 AC073488.3-201ENST00000631611 778 ntBASIC5.62□□□□□ -1.51
UPK1AO00322 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.62□□□□□ -1.51
UPK1AO00322 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
UPK1AO00322 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.62□□□□□ -1.51
UPK1AO00322 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
UPK1AO00322 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.62□□□□□ -1.51
UPK1AO00322 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
UPK1AO00322 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
UPK1AO00322 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.62□□□□□ -1.51
UPK1AO00322 MTCO1P28-201ENST00000574177 1528 ntBASIC5.62□□□□□ -1.51
UPK1AO00322 AC090181.3-201ENST00000624777 1514 ntBASIC5.62□□□□□ -1.51
UPK1AO00322 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.62□□□□□ -1.51
UPK1AO00322 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
UPK1AO00322 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.62□□□□□ -1.51
UPK1AO00322 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
UPK1AO00322 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
UPK1AO00322 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
UPK1AO00322 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.61□□□□□ -1.51
UPK1AO00322 AC093671.1-201ENST00000624981 2929 ntBASIC5.61□□□□□ -1.51
UPK1AO00322 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
UPK1AO00322 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
UPK1AO00322 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
UPK1AO00322 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
UPK1AO00322 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.61□□□□□ -1.51
UPK1AO00322 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
UPK1AO00322 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
UPK1AO00322 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.61□□□□□ -1.51
UPK1AO00322 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.61□□□□□ -1.51
UPK1AO00322 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.61□□□□□ -1.51
UPK1AO00322 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.61□□□□□ -1.51
UPK1AO00322 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.61□□□□□ -1.51
UPK1AO00322 NMD3P2-201ENST00000421815 761 ntBASIC5.61□□□□□ -1.51
UPK1AO00322 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.61□□□□□ -1.51
UPK1AO00322 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
UPK1AO00322 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.61□□□□□ -1.51
UPK1AO00322 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
UPK1AO00322 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.61□□□□□ -1.51
UPK1AO00322 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.61□□□□□ -1.51
UPK1AO00322 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
UPK1AO00322 OR52I1-201ENST00000450052 1050 ntBASIC5.61□□□□□ -1.51
UPK1AO00322 RPL12P39-201ENST00000455456 496 ntBASIC5.61□□□□□ -1.51
UPK1AO00322 YRDCP3-201ENST00000456507 480 ntBASIC5.61□□□□□ -1.51
UPK1AO00322 AC083795.1-201ENST00000491760 320 ntBASIC5.61□□□□□ -1.51
UPK1AO00322 AL117692.1-201ENST00000494283 713 ntBASIC5.61□□□□□ -1.51
UPK1AO00322 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
UPK1AO00322 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.61□□□□□ -1.51
UPK1AO00322 AC078899.1-201ENST00000521432 1185 ntBASIC5.61□□□□□ -1.51
UPK1AO00322 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.61□□□□□ -1.51
UPK1AO00322 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
UPK1AO00322 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.61□□□□□ -1.51
UPK1AO00322 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.61□□□□□ -1.51
UPK1AO00322 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.61□□□□□ -1.51
UPK1AO00322 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.61□□□□□ -1.51
UPK1AO00322 AC090826.1-203ENST00000569235 490 ntBASIC5.61□□□□□ -1.51
UPK1AO00322 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.61□□□□□ -1.51
UPK1AO00322 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.61□□□□□ -1.51
UPK1AO00322 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.61□□□□□ -1.51
UPK1AO00322 uc_338.26-201ENST00000612659 160 ntBASIC5.61□□□□□ -1.51
UPK1AO00322 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.61□□□□□ -1.51
UPK1AO00322 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
UPK1AO00322 SNX18P12-201ENST00000624821 759 ntBASIC5.61□□□□□ -1.51
UPK1AO00322 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.61□□□□□ -1.51
UPK1AO00322 AC063952.1-203ENST00000634410 658 ntBASIC5.61□□□□□ -1.51
UPK1AO00322 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.61□□□□□ -1.51
UPK1AO00322 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
UPK1AO00322 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.61□□□□□ -1.51
UPK1AO00322 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
UPK1AO00322 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
UPK1AO00322 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
UPK1AO00322 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
UPK1AO00322 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.6□□□□□ -1.51
UPK1AO00322 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.6□□□□□ -1.51
UPK1AO00322 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.6□□□□□ -1.51
UPK1AO00322 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
UPK1AO00322 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
UPK1AO00322 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.6□□□□□ -1.51
UPK1AO00322 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.6□□□□□ -1.51
UPK1AO00322 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.6□□□□□ -1.51
UPK1AO00322 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
UPK1AO00322 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.6□□□□□ -1.51
UPK1AO00322 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.6□□□□□ -1.51
UPK1AO00322 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
UPK1AO00322 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms