Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 PSG10P-201ENST00000501199 1500 ntBASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 CASC19-238ENST00000641523 1558 ntBASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 MIR130B-202ENST00000385018 82 ntBASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 AC245096.1-201ENST00000413104 546 ntBASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 SETP9-201ENST00000423837 832 ntBASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 AC097463.1-201ENST00000447288 481 ntBASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 CCDC11P1-201ENST00000503137 1162 ntBASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 SUMO2P4-201ENST00000504193 276 ntBASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 RNU6-551P-201ENST00000516661 103 ntBASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 MIR4502-201ENST00000580432 81 ntBASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 AC117490.2-201ENST00000610042 594 ntBASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 MIR6780B-201ENST00000610307 79 ntBASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 AL136097.3-201ENST00000611097 505 ntBASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 uc_338.26-201ENST00000612659 160 ntBASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 AC022164.1-201ENST00000568767 2673 ntBASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
BLOC1S4Q9NUP1 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 AC008627.1-201ENST00000517511 1704 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 AC079753.1-201ENST00000623243 3868 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 RNU4-23P-201ENST00000362839 140 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 RNU1-59P-201ENST00000364829 162 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 RNU4-64P-201ENST00000410795 131 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 RPL35AP3-201ENST00000414680 288 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 RPL12P12-201ENST00000424633 501 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 AC097523.2-201ENST00000435551 652 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 SEPT7P6-201ENST00000469999 1143 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 AC124945.1-201ENST00000485133 188 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 AGGF1P3-201ENST00000493675 1213 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 AL049779.3-201ENST00000557141 606 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 MIR3154-201ENST00000577829 84 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 AP005119.1-201ENST00000580956 292 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 AC009779.8-202ENST00000607990 932 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 U1.25-201ENST00000614085 162 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 U1.34-201ENST00000618578 162 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 FAM27E2-201ENST00000619668 403 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 U1.31-201ENST00000620022 160 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 MIR6806-201ENST00000622141 64 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms