Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 RNU105B-201ENST00000364478 208 ntBASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 MIR188-201ENST00000385034 86 ntBASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 YWHAZP6-201ENST00000399764 738 ntBASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 RNA5SP156-201ENST00000410250 110 ntBASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 DNAJA1P5-201ENST00000440278 943 ntBASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 AL391987.1-201ENST00000441025 200 ntBASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 ACA64.4-201ENST00000459070 127 ntBASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 CCDC11P1-201ENST00000503137 1162 ntBASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 TOMM22P4-201ENST00000511318 336 ntBASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 AL049779.3-201ENST00000557141 606 ntBASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 MIR6798-201ENST00000612887 67 ntBASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 AL080312.2-201ENST00000613001 630 ntBASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 KARSP1-201ENST00000451871 1752 ntBASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.18□□□□□ -1.26
UPF3BQ9BZI7 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 AC007998.4-201ENST00000612496 2533 ntBASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 OR10R3P-201ENST00000361688 942 ntBASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 AL121977.1-201ENST00000401636 979 ntBASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 AC245884.2-201ENST00000426257 404 ntBASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 AC108479.1-201ENST00000431142 427 ntBASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 SDC4P-201ENST00000453285 601 ntBASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 AC108103.1-201ENST00000511286 446 ntBASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 AC119403.2-201ENST00000590960 598 ntBASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 AL135999.3-201ENST00000610501 812 ntBASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 AL512356.3-201ENST00000623005 461 ntBASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 MVP-219ENST00000629059 120 ntTSL 5 BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 MTCO1P11-201ENST00000429111 1528 ntBASIC7.17□□□□□ -1.26
UPF3BQ9BZI7 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 AL132875.1-201ENST00000403623 949 ntBASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 AL512422.1-201ENST00000407033 553 ntBASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 AL139805.1-201ENST00000407837 289 ntBASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 RN7SKP166-201ENST00000410812 305 ntBASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 AL035422.1-201ENST00000414193 397 ntBASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms