Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC019050.1-201ENST00000418508 492 ntBASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 OR2AM1P-201ENST00000422137 422 ntBASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 AL139415.1-201ENST00000424862 352 ntBASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 AC234779.1-201ENST00000425910 285 ntBASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 AL161616.1-201ENST00000611867 286 ntBASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 OR8B9P-202ENST00000642028 5216 ntBASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 PRDM10-201ENST00000304538 5817 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 IMMTP1-201ENST00000435590 2219 ntBASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 RPS4XP5-201ENST00000419038 768 ntBASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 AC097721.1-201ENST00000427150 1253 ntBASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 AC008072.1-201ENST00000434254 824 ntBASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 AC012512.1-201ENST00000446594 718 ntBASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 AC015864.1-201ENST00000496512 544 ntBASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 ZNHIT6-202ENST00000431532 6080 ntTSL 2 BASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
CSMD1Q96PZ7 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 LCORL-207ENST00000635767 10430 ntTSL 5 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 ZDHHC21-201ENST00000380916 9160 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 AC091046.3-201ENST00000631455 1574 ntBASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 COL25A1-209ENST00000622134 4819 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 AC005294.1-201ENST00000355509 281 ntBASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 AC004690.1-201ENST00000418216 328 ntBASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 RPL21P129-201ENST00000491732 478 ntBASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 TOMM20P2-201ENST00000540082 421 ntBASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 PCNPP1-201ENST00000552501 511 ntBASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 SLC25A16-207ENST00000609923 6529 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 MXRA5-201ENST00000217939 9793 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 DOPEY2-202ENST00000399151 7685 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 RPL23AP18-201ENST00000416139 468 ntBASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 CYCSP6-201ENST00000434498 302 ntBASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 RBM22P1-201ENST00000578589 1214 ntBASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 MIR4429-201ENST00000580105 73 ntBASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 CACNA1E-205ENST00000367570 9724 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 PART1-201ENST00000504876 5616 ntTSL 2 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 EFHC1-201ENST00000371068 6987 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms