Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC006328.2-201ENST00000623198 397 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 AC012005.2-201ENST00000624333 397 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 CAP1P2-201ENST00000417455 1409 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VPS50Q96JG6 AC011369.2-201ENST00000624423 1567 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VPS50Q96JG6 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VPS50Q96JG6 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VPS50Q96JG6 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
VPS50Q96JG6 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VPS50Q96JG6 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VPS50Q96JG6 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VPS50Q96JG6 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VPS50Q96JG6 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VPS50Q96JG6 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VPS50Q96JG6 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
VPS50Q96JG6 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VPS50Q96JG6 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 AC092070.2-203ENST00000598377 3644 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VPS50Q96JG6 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 RNA5SP140-201ENST00000364524 92 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 RN7SKP237-201ENST00000364663 301 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 RNU1-59P-201ENST00000364829 162 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 PTGES3P2-201ENST00000407942 482 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 RN7SKP296-201ENST00000411185 341 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 RPS7P12-201ENST00000422385 582 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 AC073508.1-201ENST00000428866 656 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 AC098818.1-201ENST00000478593 252 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 RN7SL741P-201ENST00000482473 289 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 AC122718.2-201ENST00000505325 591 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VPS50Q96JG6 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 OR52K3P-201ENST00000531655 943 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 MT1CP-201ENST00000567054 174 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 SYPL1P2-201ENST00000582878 727 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 NDUFB9P1-201ENST00000604683 510 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 AC093635.1-201ENST00000609028 555 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 AL391834.2-201ENST00000609982 546 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 AL137246.2-201ENST00000613439 662 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 U1.25-201ENST00000614085 162 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 AC005393.1-201ENST00000617916 584 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 U1.34-201ENST00000618578 162 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 U1.31-201ENST00000620022 160 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VPS50Q96JG6 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
VPS50Q96JG6 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
VPS50Q96JG6 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VPS50Q96JG6 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 MTCO1P25-201ENST00000414449 1799 ntBASIC6.29□□□□□ -1.4
VPS50Q96JG6 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VPS50Q96JG6 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.29□□□□□ -1.4
VPS50Q96JG6 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VPS50Q96JG6 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VPS50Q96JG6 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VPS50Q96JG6 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VPS50Q96JG6 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 Z97989.1-201ENST00000531702 2421 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VPS50Q96JG6 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VPS50Q96JG6 AC005332.9-201ENST00000620266 2921 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VPS50Q96JG6 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VPS50Q96JG6 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VPS50Q96JG6 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VPS50Q96JG6 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VPS50Q96JG6 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 RN7SKP250-201ENST00000363924 321 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VPS50Q96JG6 U3.23-201ENST00000391132 200 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 DPPA2P2-201ENST00000418220 897 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms