Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 SNORA70H-201ENST00000383910 135 ntBASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 SNORA70J-201ENST00000384182 135 ntBASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 PSMA6P1-201ENST00000400275 741 ntBASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 AL445238.1-204ENST00000400311 463 ntBASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 RPS17P17-201ENST00000419392 409 ntBASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 RCC2P2-201ENST00000422174 918 ntBASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 KF459542.1-201ENST00000450908 553 ntBASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 AC103563.5-201ENST00000455643 364 ntBASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 RN7SL326P-201ENST00000477493 296 ntBASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 AC135803.1-201ENST00000608748 565 ntBASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 SHQ1P1-201ENST00000437111 1544 ntBASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP3Q96JB5 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 ZNF658B-201ENST00000602828 3408 ntBASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 RN7SKP146-201ENST00000410242 334 ntBASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 AC116036.1-201ENST00000412199 367 ntBASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 AC017019.1-201ENST00000426129 261 ntBASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 AC112492.2-201ENST00000432774 1030 ntBASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 SOCS5P1-201ENST00000440415 949 ntBASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 AL022237.1-201ENST00000446663 358 ntBASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 MORF4-201ENST00000447135 971 ntBASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 RN7SL221P-201ENST00000466190 281 ntBASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 AC117525.1-201ENST00000515228 503 ntBASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 OR7E10P-201ENST00000526420 991 ntBASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 AL137246.2-201ENST00000613439 662 ntBASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 MIR6813-201ENST00000621638 56 ntBASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 AC006453.5-201ENST00000636451 619 ntBASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.05□□□□□ -1.28
CDK5RAP3Q96JB5 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 RN7SKP237-201ENST00000364663 301 ntBASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 AC007068.1-201ENST00000396690 844 ntBASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 MTND4LP14-201ENST00000429447 288 ntBASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 LINC00328-2P-201ENST00000436585 219 ntBASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 VN1R48P-201ENST00000448149 1036 ntBASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 RARRES2P3-201ENST00000457739 473 ntBASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 OR9N1P-201ENST00000491296 333 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms