Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.03□□□□□ -1.6
RTN4IP1Q8WWV3 RN7SL261P-201ENST00000613441 282 ntBASIC5.03□□□□□ -1.6
RTN4IP1Q8WWV3 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.03□□□□□ -1.6
RTN4IP1Q8WWV3 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.03□□□□□ -1.6
RTN4IP1Q8WWV3 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
RTN4IP1Q8WWV3 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RTN4IP1Q8WWV3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RTN4IP1Q8WWV3 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.03□□□□□ -1.6
RTN4IP1Q8WWV3 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RTN4IP1Q8WWV3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RTN4IP1Q8WWV3 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
RTN4IP1Q8WWV3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RTN4IP1Q8WWV3 AC024651.2-201ENST00000562480 2098 ntBASIC5.03□□□□□ -1.6
RTN4IP1Q8WWV3 SAMM50P1-201ENST00000455403 1399 ntBASIC5.03□□□□□ -1.6
RTN4IP1Q8WWV3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.03□□□□□ -1.6
RTN4IP1Q8WWV3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 RNA5SP453-201ENST00000362503 119 ntBASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 U3.10-201ENST00000364459 214 ntBASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 METTL15P3-201ENST00000415522 1221 ntBASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 RPL7AP51-201ENST00000422016 760 ntBASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 AC010086.1-201ENST00000437359 1052 ntBASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 OR3D1P-201ENST00000438288 955 ntBASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 AC007383.1-201ENST00000445875 636 ntBASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 AC097359.1-201ENST00000447946 463 ntBASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 RN7SL552P-201ENST00000462094 276 ntBASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 AC079080.1-201ENST00000479841 822 ntBASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 RPL29P23-201ENST00000486188 442 ntBASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 RPS27P20-201ENST00000492051 246 ntBASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 GUSBP9-201ENST00000510138 584 ntBASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 AC090958.1-201ENST00000511122 351 ntBASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 RN7SL230P-201ENST00000580835 303 ntBASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 RPSAP75-201ENST00000605848 301 ntBASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 AC141002.1-201ENST00000607025 279 ntBASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RTN4IP1Q8WWV3 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 NLRP3P1-201ENST00000622303 1785 ntBASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 AC232271.1-201ENST00000602455 2715 ntBASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 AL158152.1-201ENST00000602652 1435 ntBASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 AL022311.1-201ENST00000623726 19416 ntBASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 MIR188-201ENST00000385034 86 ntBASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.01□□□□□ -1.61
RTN4IP1Q8WWV3 RNA5SP198-201ENST00000410376 127 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms