Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 HSD11B1-202ENST00000367027 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 DCAF13P1-201ENST00000495256 1330 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 RNU6-1122P-201ENST00000384449 107 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 RN7SKP85-201ENST00000411349 318 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 RPL26P37-201ENST00000411983 438 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 AL389915.1-201ENST00000422463 466 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 AC009303.1-201ENST00000426307 352 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 GPM6BP2-201ENST00000432046 144 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 AL353898.1-201ENST00000444055 238 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 GPM6BP1-201ENST00000446387 144 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 ATP5G1P6-201ENST00000451206 412 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 AC114755.1-201ENST00000453101 868 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 AL513533.1-201ENST00000453728 415 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 RN7SL201P-201ENST00000482306 296 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 SNRPD2P1-201ENST00000489253 354 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 AC008629.2-201ENST00000503783 483 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 YWHABP2-201ENST00000540201 713 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 NACA-211ENST00000548563 827 ntTSL 5 BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 AC006967.3-201ENST00000594086 1093 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 AL035413.2-201ENST00000604801 525 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 AL356052.1-201ENST00000605764 376 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 Z95327.3-201ENST00000610385 572 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 AC027807.2-201ENST00000616099 408 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 AP003972.1-201ENST00000625192 5446 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 AC093616.1-201ENST00000427434 2095 ntBASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC8.41□□□□□ -1.06
SCUBE3Q8IX30 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 GPI-202ENST00000415930 4000 ntTSL 2 BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 WASF5P-205ENST00000428639 1455 ntBASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 SMG1P1-202ENST00000309865 4223 ntBASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 RNU6-845P-201ENST00000362578 103 ntBASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 Y_RNA.72-201ENST00000362894 103 ntBASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 RNU6-767P-201ENST00000384132 107 ntBASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 AL355516.1-201ENST00000422082 746 ntTSL 3 BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 AC018644.1-201ENST00000429934 551 ntBASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 FECHP1-201ENST00000431896 1214 ntBASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 AC234064.1-201ENST00000436312 247 ntBASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 ARPC3P5-201ENST00000448802 534 ntBASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 AL135929.1-201ENST00000449287 552 ntBASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 RPL31P15-201ENST00000449770 338 ntBASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 AC140076.1-201ENST00000449897 361 ntBASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 AL590639.1-201ENST00000456484 337 ntBASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 RN7SL508P-201ENST00000464472 303 ntBASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 RPSAP39-201ENST00000467439 883 ntBASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 RPL7AP26-201ENST00000488538 813 ntBASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 AL031073.1-201ENST00000503029 1139 ntBASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 KLRA1P-201ENST00000503499 986 ntBASIC8.4□□□□□ -1.06
SCUBE3Q8IX30 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms