Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HERC6Q8IVU3 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HERC6Q8IVU3 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HERC6Q8IVU3 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AL139384.2-201ENST00000613809 3590 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 PSG10P-201ENST00000501199 1500 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AL589826.1-201ENST00000340697 249 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 RNU1-46P-201ENST00000384425 164 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AL132875.1-201ENST00000403623 949 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AL589994.1-201ENST00000404962 340 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AL139039.2-201ENST00000407436 479 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AC245096.1-201ENST00000413104 546 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AL035660.1-201ENST00000422041 222 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 MAPRE1P3-201ENST00000435438 796 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AC016908.1-201ENST00000442571 1219 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AP000281.1-201ENST00000444036 316 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AL445665.1-202ENST00000452436 324 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 SEPT7P6-201ENST00000469999 1143 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AC018558.5-201ENST00000565840 952 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AC010547.7-201ENST00000570323 333 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AP005119.1-201ENST00000580956 292 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 SDR42E1P1-201ENST00000611327 477 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 MIR6793-201ENST00000612376 63 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AL356752.1-201ENST00000615844 593 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AC005393.1-201ENST00000617916 584 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AC069234.4-201ENST00000621276 412 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 MIR6719-201ENST00000622428 87 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 AL157831.2-201ENST00000564681 3095 ntBASIC6.78□□□□□ -1.32
HERC6Q8IVU3 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HERC6Q8IVU3 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.77□□□□□ -1.32
HERC6Q8IVU3 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
HERC6Q8IVU3 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
HERC6Q8IVU3 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
HERC6Q8IVU3 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.77□□□□□ -1.33
HERC6Q8IVU3 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.77□□□□□ -1.33
HERC6Q8IVU3 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.77□□□□□ -1.33
HERC6Q8IVU3 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HERC6Q8IVU3 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.77□□□□□ -1.33
HERC6Q8IVU3 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HERC6Q8IVU3 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.77□□□□□ -1.33
HERC6Q8IVU3 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HERC6Q8IVU3 MIR143-201ENST00000385300 106 ntBASIC6.77□□□□□ -1.33
HERC6Q8IVU3 DHFRP5-201ENST00000406944 564 ntBASIC6.77□□□□□ -1.33
HERC6Q8IVU3 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.77□□□□□ -1.33
HERC6Q8IVU3 SDHDP6-201ENST00000414693 480 ntBASIC6.77□□□□□ -1.33
HERC6Q8IVU3 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.77□□□□□ -1.33
HERC6Q8IVU3 PCBP2P1-201ENST00000437262 977 ntBASIC6.77□□□□□ -1.33
HERC6Q8IVU3 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.77□□□□□ -1.33
HERC6Q8IVU3 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.77□□□□□ -1.33
HERC6Q8IVU3 MTND3P4-201ENST00000453537 303 ntBASIC6.77□□□□□ -1.33
HERC6Q8IVU3 YWHAEP1-201ENST00000453697 763 ntBASIC6.77□□□□□ -1.33
HERC6Q8IVU3 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC6.77□□□□□ -1.33
HERC6Q8IVU3 RPSAP37-201ENST00000470913 821 ntBASIC6.77□□□□□ -1.33
HERC6Q8IVU3 OR52A4P-202ENST00000481634 799 ntBASIC6.77□□□□□ -1.33
HERC6Q8IVU3 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms