Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 OR7A1P-202ENST00000641542 1158 ntBASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AL157831.2-201ENST00000564681 3095 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AL359091.1-201ENST00000449048 1734 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AP002512.4-202ENST00000641599 4530 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 RNFT1P3-201ENST00000340898 1052 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 OR7E25P-201ENST00000344844 931 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 RNA5SP273-201ENST00000362484 113 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 RNA5SP477-201ENST00000362639 119 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AL132875.1-201ENST00000403623 949 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AL096711.1-201ENST00000404780 554 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AL451046.1-201ENST00000406097 534 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 RPS7P8-201ENST00000418311 581 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 RPL12P12-201ENST00000424633 501 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 CDY8P-201ENST00000428380 1279 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AC009237.1-201ENST00000442127 744 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 CDY20P-201ENST00000447528 1279 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AC021733.2-201ENST00000518830 497 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AC092865.1-201ENST00000544395 1023 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AC005244.1-201ENST00000582566 339 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AL645933.2-201ENST00000606743 1207 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AC141002.1-201ENST00000607025 279 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AL137067.2-201ENST00000621202 131 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AP001962.1-201ENST00000624114 559 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AC092692.1-201ENST00000623625 2595 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 AC010401.2-201ENST00000575137 4934 ntBASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
H3F3CQ6NXT2 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 RNU105B-201ENST00000364478 208 ntBASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 AL096829.1-201ENST00000413677 457 ntBASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 VN1R110P-201ENST00000438988 971 ntBASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 ZNF619P1-201ENST00000446539 752 ntBASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 AC093815.1-201ENST00000508637 280 ntBASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 OR5H7P-201ENST00000514084 930 ntBASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 SCARNA18.1-201ENST00000516330 83 ntBASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 RNA5SP271-201ENST00000516700 88 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms