Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
CDC42BPAQ5VT25 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
CDC42BPAQ5VT25 AC092070.2-203ENST00000598377 3644 ntBASIC8.71□□□□□ -1.01
CDC42BPAQ5VT25 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC8.71□□□□□ -1.01
CDC42BPAQ5VT25 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 AL034549.2-201ENST00000618285 3373 ntBASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 SSX3-202ENST00000376893 800 ntTSL 2 BASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 AC005042.1-201ENST00000393397 800 ntBASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 RN7SKP125-201ENST00000410481 302 ntBASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 AP002884.5-201ENST00000595053 1132 ntBASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 AC126915.2-201ENST00000610957 190 ntBASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 CASC22-202ENST00000628396 802 ntTSL 5 BASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 EEF1A1P30-201ENST00000429708 1315 ntBASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 AC005224.3-201ENST00000584683 2140 ntBASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42BPAQ5VT25 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 AL359922.2-201ENST00000581788 3017 ntBASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 KCNMB3P1-202ENST00000493696 3389 ntBASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 RN7SL860P-201ENST00000473738 223 ntBASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42BPAQ5VT25 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 AC007568.1-201ENST00000422912 471 ntBASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 LDHBP2-201ENST00000456969 1005 ntBASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 RN7SL808P-201ENST00000496066 299 ntBASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 AC139697.1-201ENST00000548429 745 ntBASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 AL121612.2-201ENST00000612261 482 ntBASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 AP002505.2-201ENST00000623585 696 ntBASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 PABPC1P8-201ENST00000452851 2086 ntBASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 AC007938.2-201ENST00000604666 2634 ntBASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42BPAQ5VT25 RNA5SP335-201ENST00000363817 110 ntBASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 AL109941.1-201ENST00000401925 229 ntBASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 MRM2-202ENST00000407040 582 ntTSL 3 BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 RN7SL352P-201ENST00000466002 277 ntBASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 Mico1.1-201ENST00000611698 204 ntBASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 AC008115.3-201ENST00000614874 549 ntBASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 ZNF658B-201ENST00000602828 3408 ntBASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms