Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRRK2Q5S007 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRRK2Q5S007 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRRK2Q5S007 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LRRK2Q5S007 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRRK2Q5S007 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRRK2Q5S007 AL133325.1-201ENST00000421090 382 ntBASIC5.19□□□□□ -1.58
LRRK2Q5S007 AC108075.1-201ENST00000424692 529 ntBASIC5.19□□□□□ -1.58
LRRK2Q5S007 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 AC245047.5-201ENST00000437312 556 ntBASIC5.19□□□□□ -1.58
LRRK2Q5S007 AC011753.3-201ENST00000443436 406 ntBASIC5.19□□□□□ -1.58
LRRK2Q5S007 AL139156.3-201ENST00000454802 394 ntBASIC5.19□□□□□ -1.58
LRRK2Q5S007 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 AC147055.3-201ENST00000510547 851 ntBASIC5.19□□□□□ -1.58
LRRK2Q5S007 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 AC126177.5-201ENST00000549599 178 ntBASIC5.19□□□□□ -1.58
LRRK2Q5S007 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 SAMMSON-209ENST00000641222 1100 ntBASIC5.19□□□□□ -1.58
LRRK2Q5S007 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LRRK2Q5S007 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
LRRK2Q5S007 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LRRK2Q5S007 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC5.18□□□□□ -1.58
LRRK2Q5S007 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LRRK2Q5S007 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LRRK2Q5S007 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LRRK2Q5S007 AC126120.1-201ENST00000431082 470 ntBASIC5.18□□□□□ -1.58
LRRK2Q5S007 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LRRK2Q5S007 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.18□□□□□ -1.58
LRRK2Q5S007 AL161722.1-201ENST00000446972 1032 ntBASIC5.18□□□□□ -1.58
LRRK2Q5S007 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.18□□□□□ -1.58
LRRK2Q5S007 AC100784.1-201ENST00000522790 310 ntBASIC5.18□□□□□ -1.58
LRRK2Q5S007 AC015720.2-201ENST00000567709 334 ntBASIC5.18□□□□□ -1.58
LRRK2Q5S007 AC209154.1-201ENST00000582156 337 ntBASIC5.18□□□□□ -1.58
LRRK2Q5S007 AC063977.5-201ENST00000601044 974 ntBASIC5.18□□□□□ -1.58
LRRK2Q5S007 AC007204.2-201ENST00000615022 616 ntBASIC5.18□□□□□ -1.58
LRRK2Q5S007 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.18□□□□□ -1.58
LRRK2Q5S007 AC183089.2-201ENST00000637931 916 ntBASIC5.18□□□□□ -1.58
LRRK2Q5S007 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LRRK2Q5S007 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LRRK2Q5S007 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC5.18□□□□□ -1.58
LRRK2Q5S007 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
LRRK2Q5S007 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.18□□□□□ -1.58
LRRK2Q5S007 AC012360.3-201ENST00000610036 3449 ntBASIC5.18□□□□□ -1.58
LRRK2Q5S007 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC5.18□□□□□ -1.58
LRRK2Q5S007 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LRRK2Q5S007 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC5.18□□□□□ -1.58
LRRK2Q5S007 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LRRK2Q5S007 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LRRK2Q5S007 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LRRK2Q5S007 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LRRK2Q5S007 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.18□□□□□ -1.58
LRRK2Q5S007 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC5.18□□□□□ -1.58
LRRK2Q5S007 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
LRRK2Q5S007 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.18□□□□□ -1.58
LRRK2Q5S007 AC099521.1-201ENST00000482557 334 ntBASIC5.18□□□□□ -1.58
LRRK2Q5S007 PGAM1P13-201ENST00000507497 754 ntBASIC5.18□□□□□ -1.58
LRRK2Q5S007 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.18□□□□□ -1.58
LRRK2Q5S007 AC136624.4-201ENST00000573044 370 ntBASIC5.18□□□□□ -1.58
LRRK2Q5S007 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.18□□□□□ -1.58
LRRK2Q5S007 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.18□□□□□ -1.58
LRRK2Q5S007 MIR6780A-201ENST00000615089 68 ntBASIC5.18□□□□□ -1.58
LRRK2Q5S007 AC087385.3-201ENST00000620477 187 ntBASIC5.18□□□□□ -1.58
LRRK2Q5S007 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
LRRK2Q5S007 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC5.18□□□□□ -1.58
LRRK2Q5S007 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC5.18□□□□□ -1.58
LRRK2Q5S007 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LRRK2Q5S007 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC5.17□□□□□ -1.58
LRRK2Q5S007 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC5.17□□□□□ -1.58
LRRK2Q5S007 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LRRK2Q5S007 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LRRK2Q5S007 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LRRK2Q5S007 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LRRK2Q5S007 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LRRK2Q5S007 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
LRRK2Q5S007 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.17□□□□□ -1.58
LRRK2Q5S007 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LRRK2Q5S007 AC092324.1-201ENST00000468671 324 ntBASIC5.17□□□□□ -1.58
LRRK2Q5S007 AC068587.1-201ENST00000483613 781 ntBASIC5.17□□□□□ -1.58
LRRK2Q5S007 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.17□□□□□ -1.58
LRRK2Q5S007 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.17□□□□□ -1.58
LRRK2Q5S007 HMGB1P42-201ENST00000532126 553 ntBASIC5.17□□□□□ -1.58
LRRK2Q5S007 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.17□□□□□ -1.58
LRRK2Q5S007 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.17□□□□□ -1.58
LRRK2Q5S007 GTF2IP6-201ENST00000583143 541 ntBASIC5.17□□□□□ -1.58
LRRK2Q5S007 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.17□□□□□ -1.58
LRRK2Q5S007 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.17□□□□□ -1.58
LRRK2Q5S007 AC006116.3-201ENST00000592968 361 ntBASIC5.17□□□□□ -1.58
LRRK2Q5S007 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.17□□□□□ -1.58
LRRK2Q5S007 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.17□□□□□ -1.58
LRRK2Q5S007 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms