Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.23□□□□□ -1.09
PTCH1Q13635 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PTCH1Q13635 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PTCH1Q13635 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PTCH1Q13635 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
PTCH1Q13635 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PTCH1Q13635 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PTCH1Q13635 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PTCH1Q13635 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC8.23□□□□□ -1.09
PTCH1Q13635 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC8.23□□□□□ -1.09
PTCH1Q13635 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PTCH1Q13635 AC022819.1-201ENST00000563495 3910 ntBASIC8.23□□□□□ -1.09
PTCH1Q13635 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC8.23□□□□□ -1.09
PTCH1Q13635 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PTCH1Q13635 OR2W4P-201ENST00000406496 926 ntBASIC8.22□□□□□ -1.09
PTCH1Q13635 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC8.22□□□□□ -1.09
PTCH1Q13635 AC005297.1-201ENST00000444765 862 ntBASIC8.22□□□□□ -1.09
PTCH1Q13635 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC8.22□□□□□ -1.09
PTCH1Q13635 AL606490.1-201ENST00000452266 765 ntBASIC8.22□□□□□ -1.09
PTCH1Q13635 RN7SL30P-201ENST00000488416 306 ntBASIC8.22□□□□□ -1.09
PTCH1Q13635 OR5D15P-201ENST00000531671 942 ntBASIC8.22□□□□□ -1.09
PTCH1Q13635 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC8.22□□□□□ -1.09
PTCH1Q13635 AC145423.1-201ENST00000605712 336 ntBASIC8.22□□□□□ -1.09
PTCH1Q13635 MIR6820-201ENST00000611508 62 ntBASIC8.22□□□□□ -1.09
PTCH1Q13635 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
PTCH1Q13635 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PTCH1Q13635 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC8.22□□□□□ -1.09
PTCH1Q13635 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PTCH1Q13635 AL592429.1-201ENST00000403909 1473 ntBASIC8.22□□□□□ -1.09
PTCH1Q13635 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
PTCH1Q13635 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC8.22□□□□□ -1.09
PTCH1Q13635 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC8.22□□□□□ -1.09
PTCH1Q13635 AC008957.3-201ENST00000624112 2242 ntBASIC8.22□□□□□ -1.09
PTCH1Q13635 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC8.22□□□□□ -1.09
PTCH1Q13635 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PTCH1Q13635 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
PTCH1Q13635 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
PTCH1Q13635 AL357752.1-201ENST00000412817 349 ntBASIC8.21□□□□□ -1.09
PTCH1Q13635 RPL23AP27-201ENST00000415161 451 ntBASIC8.21□□□□□ -1.09
PTCH1Q13635 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC8.21□□□□□ -1.09
PTCH1Q13635 EEF1B2P5-201ENST00000444820 548 ntBASIC8.21□□□□□ -1.09
PTCH1Q13635 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PTCH1Q13635 RN7SL222P-201ENST00000476452 299 ntBASIC8.21□□□□□ -1.09
PTCH1Q13635 AC024558.1-201ENST00000505008 528 ntBASIC8.21□□□□□ -1.09
PTCH1Q13635 HIGD1AP14-201ENST00000507617 282 ntBASIC8.21□□□□□ -1.09
PTCH1Q13635 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PTCH1Q13635 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC8.21□□□□□ -1.09
PTCH1Q13635 PPATP2-201ENST00000605635 508 ntBASIC8.21□□□□□ -1.09
PTCH1Q13635 AL512329.2-201ENST00000607350 548 ntBASIC8.21□□□□□ -1.09
PTCH1Q13635 uc_338.26-201ENST00000612659 160 ntBASIC8.21□□□□□ -1.09
PTCH1Q13635 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC8.21□□□□□ -1.09
PTCH1Q13635 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC8.21□□□□□ -1.09
PTCH1Q13635 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PTCH1Q13635 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC8.21□□□□□ -1.09
PTCH1Q13635 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PTCH1Q13635 SRRM1P3-201ENST00000426911 2678 ntBASIC8.21□□□□□ -1.1
PTCH1Q13635 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC8.21□□□□□ -1.1
PTCH1Q13635 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC8.21□□□□□ -1.1
PTCH1Q13635 AC007842.1-201ENST00000597336 2039 ntBASIC8.21□□□□□ -1.1
PTCH1Q13635 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
PTCH1Q13635 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC8.21□□□□□ -1.1
PTCH1Q13635 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PTCH1Q13635 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC8.21□□□□□ -1.1
PTCH1Q13635 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PTCH1Q13635 CASC19-248ENST00000641674 1356 ntBASIC8.21□□□□□ -1.1
PTCH1Q13635 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PTCH1Q13635 RN7SKP103-201ENST00000363848 320 ntBASIC8.2□□□□□ -1.1
PTCH1Q13635 RN7SKP273-201ENST00000411392 314 ntBASIC8.2□□□□□ -1.1
PTCH1Q13635 OR5W1P-201ENST00000423705 938 ntBASIC8.2□□□□□ -1.1
PTCH1Q13635 RANP1-206ENST00000455094 651 ntBASIC8.2□□□□□ -1.1
PTCH1Q13635 AC103563.5-201ENST00000455643 364 ntBASIC8.2□□□□□ -1.1
PTCH1Q13635 AC112187.1-201ENST00000455837 479 ntBASIC8.2□□□□□ -1.1
PTCH1Q13635 AC105420.1-201ENST00000504389 582 ntBASIC8.2□□□□□ -1.1
PTCH1Q13635 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC8.2□□□□□ -1.1
PTCH1Q13635 HMGN2P6-201ENST00000551091 273 ntBASIC8.2□□□□□ -1.1
PTCH1Q13635 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC8.2□□□□□ -1.1
PTCH1Q13635 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
PTCH1Q13635 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PTCH1Q13635 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC8.2□□□□□ -1.1
PTCH1Q13635 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC8.2□□□□□ -1.1
PTCH1Q13635 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
PTCH1Q13635 ERG-202ENST00000398897 4651 ntTSL 5 BASIC8.2□□□□□ -1.1
PTCH1Q13635 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
PTCH1Q13635 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PTCH1Q13635 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
PTCH1Q13635 AFP-201ENST00000226359 1914 ntTSL 5 BASIC8.2□□□□□ -1.1
PTCH1Q13635 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PTCH1Q13635 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PTCH1Q13635 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC8.2□□□□□ -1.1
PTCH1Q13635 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
PTCH1Q13635 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PTCH1Q13635 AL161756.3-201ENST00000641216 2071 ntBASIC8.2□□□□□ -1.1
PTCH1Q13635 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC8.2□□□□□ -1.1
PTCH1Q13635 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC8.2□□□□□ -1.1
PTCH1Q13635 RNA5SP131-201ENST00000365452 119 ntBASIC8.2□□□□□ -1.1
PTCH1Q13635 AL353626.3-201ENST00000413399 657 ntBASIC8.2□□□□□ -1.1
PTCH1Q13635 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC8.2□□□□□ -1.1
PTCH1Q13635 RBMY2KP-201ENST00000418221 992 ntBASIC8.2□□□□□ -1.1
PTCH1Q13635 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC8.2□□□□□ -1.1
PTCH1Q13635 AL139148.1-201ENST00000427122 680 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms