Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 PARP4P2-201ENST00000446672 3326 ntBASIC6.99□□□□□ -1.29
GABPAQ06546 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
GABPAQ06546 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.99□□□□□ -1.29
GABPAQ06546 MYL6P5-201ENST00000412707 459 ntBASIC6.99□□□□□ -1.29
GABPAQ06546 HMGA1P8-201ENST00000414130 321 ntBASIC6.99□□□□□ -1.29
GABPAQ06546 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
GABPAQ06546 AC099677.3-201ENST00000427081 395 ntBASIC6.99□□□□□ -1.29
GABPAQ06546 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
GABPAQ06546 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
GABPAQ06546 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.99□□□□□ -1.29
GABPAQ06546 SNORA70.20-201ENST00000516848 126 ntBASIC6.99□□□□□ -1.29
GABPAQ06546 TMEM97P2-201ENST00000517841 403 ntBASIC6.99□□□□□ -1.29
GABPAQ06546 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.99□□□□□ -1.29
GABPAQ06546 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.99□□□□□ -1.29
GABPAQ06546 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.99□□□□□ -1.29
GABPAQ06546 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.99□□□□□ -1.29
GABPAQ06546 AC090651.1-201ENST00000567865 634 ntBASIC6.99□□□□□ -1.29
GABPAQ06546 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.99□□□□□ -1.29
GABPAQ06546 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.99□□□□□ -1.29
GABPAQ06546 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
GABPAQ06546 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
GABPAQ06546 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.99□□□□□ -1.29
GABPAQ06546 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.99□□□□□ -1.29
GABPAQ06546 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.99□□□□□ -1.29
GABPAQ06546 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
GABPAQ06546 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
GABPAQ06546 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
GABPAQ06546 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
GABPAQ06546 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.99□□□□□ -1.29
GABPAQ06546 AC009831.5-201ENST00000624000 3189 ntBASIC6.99□□□□□ -1.29
GABPAQ06546 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
GABPAQ06546 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.99□□□□□ -1.29
GABPAQ06546 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
GABPAQ06546 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
GABPAQ06546 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.99□□□□□ -1.29
GABPAQ06546 AC027279.1-201ENST00000568885 4284 ntBASIC6.98□□□□□ -1.29
GABPAQ06546 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
GABPAQ06546 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.98□□□□□ -1.29
GABPAQ06546 AL589993.1-201ENST00000407450 2524 ntBASIC6.98□□□□□ -1.29
GABPAQ06546 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
GABPAQ06546 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
GABPAQ06546 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
GABPAQ06546 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
GABPAQ06546 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
GABPAQ06546 SNORA64.1-201ENST00000362600 132 ntBASIC6.98□□□□□ -1.29
GABPAQ06546 RNA5SP242-201ENST00000364171 118 ntBASIC6.98□□□□□ -1.29
GABPAQ06546 AP003170.5-201ENST00000397185 335 ntBASIC6.98□□□□□ -1.29
GABPAQ06546 RNA5SP178-201ENST00000410380 128 ntBASIC6.98□□□□□ -1.29
GABPAQ06546 RN7SKP29-201ENST00000410957 272 ntBASIC6.98□□□□□ -1.29
GABPAQ06546 AC116036.1-201ENST00000412199 367 ntBASIC6.98□□□□□ -1.29
GABPAQ06546 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.98□□□□□ -1.29
GABPAQ06546 BX119321.1-201ENST00000428912 797 ntBASIC6.98□□□□□ -1.29
GABPAQ06546 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.98□□□□□ -1.29
GABPAQ06546 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.98□□□□□ -1.29
GABPAQ06546 RPL36AP39-201ENST00000445859 318 ntBASIC6.98□□□□□ -1.29
GABPAQ06546 UBE2V2P4-201ENST00000447495 259 ntBASIC6.98□□□□□ -1.29
GABPAQ06546 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.98□□□□□ -1.29
GABPAQ06546 AL157777.1-201ENST00000468100 304 ntBASIC6.98□□□□□ -1.29
GABPAQ06546 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.98□□□□□ -1.29
GABPAQ06546 NENFP3-201ENST00000503735 313 ntBASIC6.98□□□□□ -1.29
GABPAQ06546 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.98□□□□□ -1.29
GABPAQ06546 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.98□□□□□ -1.29
GABPAQ06546 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.98□□□□□ -1.29
GABPAQ06546 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.98□□□□□ -1.29
GABPAQ06546 AC010547.6-201ENST00000571789 193 ntBASIC6.98□□□□□ -1.29
GABPAQ06546 AC015802.2-201ENST00000589690 189 ntBASIC6.98□□□□□ -1.29
GABPAQ06546 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.98□□□□□ -1.29
GABPAQ06546 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.98□□□□□ -1.29
GABPAQ06546 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.98□□□□□ -1.29
GABPAQ06546 AC004890.3-201ENST00000605566 1095 ntBASIC6.98□□□□□ -1.29
GABPAQ06546 RN7SL787P-201ENST00000613000 284 ntBASIC6.98□□□□□ -1.29
GABPAQ06546 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC6.98□□□□□ -1.29
GABPAQ06546 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
GABPAQ06546 MIR193BHG-214ENST00000641765 509 ntBASIC6.98□□□□□ -1.29
GABPAQ06546 AL161901.1-201ENST00000624954 3425 ntBASIC6.98□□□□□ -1.29
GABPAQ06546 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.98□□□□□ -1.29
GABPAQ06546 SALL4P7-201ENST00000555779 3120 ntBASIC6.98□□□□□ -1.29
GABPAQ06546 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
GABPAQ06546 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.98□□□□□ -1.29
GABPAQ06546 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.98□□□□□ -1.29
GABPAQ06546 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
GABPAQ06546 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.98□□□□□ -1.29
GABPAQ06546 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.98□□□□□ -1.29
GABPAQ06546 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
GABPAQ06546 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
GABPAQ06546 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.97□□□□□ -1.29
GABPAQ06546 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
GABPAQ06546 AL121768.1-201ENST00000613917 2544 ntBASIC6.97□□□□□ -1.29
GABPAQ06546 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.97□□□□□ -1.29
GABPAQ06546 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.97□□□□□ -1.29
GABPAQ06546 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
GABPAQ06546 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
GABPAQ06546 SNORA51.1-201ENST00000363243 140 ntBASIC6.97□□□□□ -1.29
GABPAQ06546 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.97□□□□□ -1.29
GABPAQ06546 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
GABPAQ06546 SDHDP6-201ENST00000414693 480 ntBASIC6.97□□□□□ -1.29
GABPAQ06546 AC079355.1-201ENST00000421770 223 ntBASIC6.97□□□□□ -1.29
GABPAQ06546 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.97□□□□□ -1.29
GABPAQ06546 RPL7L1P3-201ENST00000455249 689 ntBASIC6.97□□□□□ -1.29
GABPAQ06546 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms