Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MIR5095-201ENST00000578844 88 ntBASIC3.49□□□□□ -1.85
HSPG2P98160 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.49□□□□□ -1.85
HSPG2P98160 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC3.49□□□□□ -1.85
HSPG2P98160 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC3.49□□□□□ -1.85
HSPG2P98160 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.49□□□□□ -1.85
HSPG2P98160 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HSPG2P98160 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HSPG2P98160 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HSPG2P98160 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HSPG2P98160 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HSPG2P98160 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC3.48□□□□□ -1.85
HSPG2P98160 AP002364.1-201ENST00000623330 3386 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
HSPG2P98160 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HSPG2P98160 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC3.48□□□□□ -1.85
HSPG2P98160 COL4A6-203ENST00000394872 6750 ntTSL 5 BASIC3.48□□□□□ -1.85
HSPG2P98160 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
HSPG2P98160 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
HSPG2P98160 DLG1-201ENST00000346964 5034 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 RN7SKP95-201ENST00000362860 303 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 CAV1-204ENST00000393470 598 ntTSL 4 BASIC3.48□□□□□ -1.85
HSPG2P98160 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC3.48□□□□□ -1.85
HSPG2P98160 RN7SKP100-201ENST00000411258 284 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.48□□□□□ -1.85
HSPG2P98160 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.48□□□□□ -1.85
HSPG2P98160 AC091390.2-201ENST00000432573 374 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC3.48□□□□□ -1.85
HSPG2P98160 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
HSPG2P98160 RN7SL205P-201ENST00000490174 284 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC3.48□□□□□ -1.85
HSPG2P98160 GCSHP4-201ENST00000538792 439 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
HSPG2P98160 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.48□□□□□ -1.85
HSPG2P98160 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC3.48□□□□□ -1.85
HSPG2P98160 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.48□□□□□ -1.85
HSPG2P98160 MIR4277-201ENST00000578298 84 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 RN7SL52P-201ENST00000584271 284 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 AC139493.1-201ENST00000604368 397 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 RN7SL722P-201ENST00000617780 284 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 RN7SL565P-201ENST00000618246 284 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 AC091905.4-201ENST00000623432 202 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
HSPG2P98160 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
HSPG2P98160 GPR107-201ENST00000347136 7209 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 ZAN-204ENST00000546292 8378 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HSPG2P98160 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC3.48□□□□□ -1.85
HSPG2P98160 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC3.48□□□□□ -1.85
HSPG2P98160 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 SLC24A4-201ENST00000393265 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 SCN5A-208ENST00000450102 6284 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
HSPG2P98160 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HSPG2P98160 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
HSPG2P98160 MIR23B-201ENST00000384832 97 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
HSPG2P98160 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
HSPG2P98160 RPL21P129-201ENST00000491732 478 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 DUTP1-201ENST00000493631 470 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 RPS4XP20-201ENST00000505751 772 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC3.48□□□□□ -1.85
HSPG2P98160 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC3.48□□□□□ -1.85
HSPG2P98160 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC3.48□□□□□ -1.85
HSPG2P98160 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC3.48□□□□□ -1.85
HSPG2P98160 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC3.48□□□□□ -1.85
HSPG2P98160 AC091042.1-201ENST00000579213 173 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 AC103792.1-201ENST00000603591 919 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 TACC2-212ENST00000453444 9158 ntTSL 5 BASIC3.48□□□□□ -1.85
HSPG2P98160 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC3.48□□□□□ -1.85
HSPG2P98160 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC3.48□□□□□ -1.85
HSPG2P98160 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HSPG2P98160 TAOK1-201ENST00000261716 12407 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 UBE2V1P14-201ENST00000415815 558 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 AL133482.1-201ENST00000415988 498 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 AL022237.1-201ENST00000446663 358 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.48□□□□□ -1.85
HSPG2P98160 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.48□□□□□ -1.85
HSPG2P98160 RNA5SP400-201ENST00000517155 111 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC3.48□□□□□ -1.85
HSPG2P98160 PCNPP1-201ENST00000552501 511 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 AC009117.1-201ENST00000563948 554 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 AC010435.1-201ENST00000623353 1177 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms