Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AP001267.4-201ENST00000602598 545 ntBASIC5.75□□□□□ -1.49
CDH12P55289 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH12P55289 AL591222.2-201ENST00000604443 754 ntBASIC5.75□□□□□ -1.49
CDH12P55289 AL355816.2-201ENST00000610049 647 ntBASIC5.75□□□□□ -1.49
CDH12P55289 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH12P55289 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.75□□□□□ -1.49
CDH12P55289 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH12P55289 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH12P55289 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH12P55289 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CDH12P55289 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDH12P55289 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
CDH12P55289 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH12P55289 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH12P55289 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH12P55289 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH12P55289 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDH12P55289 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH12P55289 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH12P55289 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH12P55289 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
CDH12P55289 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH12P55289 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH12P55289 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH12P55289 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CDH12P55289 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH12P55289 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH12P55289 AL354707.3-201ENST00000427308 331 ntBASIC5.74□□□□□ -1.49
CDH12P55289 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH12P55289 AC234771.4-201ENST00000441416 730 ntBASIC5.74□□□□□ -1.49
CDH12P55289 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH12P55289 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.74□□□□□ -1.49
CDH12P55289 EIF2S2P4-201ENST00000461070 984 ntBASIC5.74□□□□□ -1.49
CDH12P55289 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH12P55289 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH12P55289 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH12P55289 AC093325.1-201ENST00000508378 326 ntBASIC5.74□□□□□ -1.49
CDH12P55289 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH12P55289 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.74□□□□□ -1.49
CDH12P55289 HMGN1P15-201ENST00000513870 295 ntBASIC5.74□□□□□ -1.49
CDH12P55289 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.74□□□□□ -1.49
CDH12P55289 RNA5SP418-201ENST00000515951 117 ntBASIC5.74□□□□□ -1.49
CDH12P55289 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH12P55289 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.74□□□□□ -1.49
CDH12P55289 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH12P55289 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH12P55289 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH12P55289 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH12P55289 AC126365.2-201ENST00000580630 379 ntBASIC5.74□□□□□ -1.49
CDH12P55289 MIR4420-201ENST00000583944 77 ntBASIC5.74□□□□□ -1.49
CDH12P55289 AC090330.1-201ENST00000588646 764 ntBASIC5.74□□□□□ -1.49
CDH12P55289 AC020916.2-201ENST00000591242 360 ntBASIC5.74□□□□□ -1.49
CDH12P55289 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH12P55289 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.74□□□□□ -1.49
CDH12P55289 AL671309.1-201ENST00000603750 544 ntBASIC5.74□□□□□ -1.49
CDH12P55289 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.74□□□□□ -1.49
CDH12P55289 AC110792.4-201ENST00000609843 298 ntBASIC5.74□□□□□ -1.49
CDH12P55289 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH12P55289 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH12P55289 AC022919.1-201ENST00000624979 626 ntBASIC5.74□□□□□ -1.49
CDH12P55289 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH12P55289 AL136984.1-201ENST00000607611 1893 ntBASIC5.74□□□□□ -1.49
CDH12P55289 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH12P55289 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH12P55289 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH12P55289 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH12P55289 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH12P55289 AL592494.2-201ENST00000425455 1548 ntBASIC5.74□□□□□ -1.49
CDH12P55289 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH12P55289 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH12P55289 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH12P55289 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH12P55289 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH12P55289 AC015799.1-201ENST00000622996 3122 ntBASIC5.73□□□□□ -1.49
CDH12P55289 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH12P55289 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
CDH12P55289 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH12P55289 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH12P55289 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH12P55289 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH12P55289 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH12P55289 RNU4-39P-201ENST00000362455 127 ntBASIC5.73□□□□□ -1.49
CDH12P55289 RN7SKP257-201ENST00000364525 309 ntBASIC5.73□□□□□ -1.49
CDH12P55289 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
CDH12P55289 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH12P55289 CCNB2P1-201ENST00000399411 1150 ntBASIC5.73□□□□□ -1.49
CDH12P55289 UBTFL2-201ENST00000411859 1191 ntBASIC5.73□□□□□ -1.49
CDH12P55289 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH12P55289 AC021876.1-201ENST00000425959 359 ntBASIC5.73□□□□□ -1.49
CDH12P55289 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH12P55289 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CDH12P55289 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.73□□□□□ -1.49
CDH12P55289 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH12P55289 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.73□□□□□ -1.49
CDH12P55289 GTF3AP6-201ENST00000432585 986 ntBASIC5.73□□□□□ -1.49
CDH12P55289 SUMO2P8-201ENST00000434672 286 ntBASIC5.73□□□□□ -1.49
CDH12P55289 AL731534.1-201ENST00000434711 269 ntBASIC5.73□□□□□ -1.49
CDH12P55289 NPM1P23-201ENST00000440193 849 ntBASIC5.73□□□□□ -1.49
CDH12P55289 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH12P55289 MTND2P30-201ENST00000456663 382 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms