Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.4□□□□□ -1.38
BRCC3P46736 PTCD2P2-201ENST00000415579 1095 ntBASIC6.4□□□□□ -1.38
BRCC3P46736 CHEK2P5-201ENST00000423877 246 ntBASIC6.4□□□□□ -1.38
BRCC3P46736 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.4□□□□□ -1.38
BRCC3P46736 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.4□□□□□ -1.38
BRCC3P46736 AL161636.2-201ENST00000445179 927 ntBASIC6.4□□□□□ -1.38
BRCC3P46736 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.4□□□□□ -1.38
BRCC3P46736 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.4□□□□□ -1.38
BRCC3P46736 RPL23AP60-201ENST00000450011 454 ntBASIC6.4□□□□□ -1.38
BRCC3P46736 RN7SL174P-201ENST00000475578 289 ntBASIC6.4□□□□□ -1.38
BRCC3P46736 FTH1P8-201ENST00000498161 514 ntBASIC6.4□□□□□ -1.38
BRCC3P46736 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
BRCC3P46736 TPM3P3-201ENST00000521343 354 ntBASIC6.4□□□□□ -1.38
BRCC3P46736 AP000648.1-201ENST00000529682 397 ntBASIC6.4□□□□□ -1.38
BRCC3P46736 OR4A40P-201ENST00000533878 948 ntBASIC6.4□□□□□ -1.38
BRCC3P46736 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
BRCC3P46736 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.4□□□□□ -1.38
BRCC3P46736 AL356801.1-201ENST00000559320 294 ntBASIC6.4□□□□□ -1.38
BRCC3P46736 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.4□□□□□ -1.38
BRCC3P46736 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.4□□□□□ -1.38
BRCC3P46736 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.4□□□□□ -1.38
BRCC3P46736 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.4□□□□□ -1.38
BRCC3P46736 AC119403.2-201ENST00000590960 598 ntBASIC6.4□□□□□ -1.38
BRCC3P46736 AC137695.1-201ENST00000604126 489 ntBASIC6.4□□□□□ -1.38
BRCC3P46736 AL031601.1-201ENST00000605702 394 ntBASIC6.4□□□□□ -1.38
BRCC3P46736 AL357153.4-201ENST00000620487 1016 ntBASIC6.4□□□□□ -1.38
BRCC3P46736 ZNF969P-201ENST00000510345 2341 ntBASIC6.4□□□□□ -1.38
BRCC3P46736 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.4□□□□□ -1.39
BRCC3P46736 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
BRCC3P46736 AL662795.2-201ENST00000624252 3706 ntBASIC6.4□□□□□ -1.39
BRCC3P46736 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
BRCC3P46736 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
BRCC3P46736 WDR95P-201ENST00000425638 1542 ntBASIC6.4□□□□□ -1.39
BRCC3P46736 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.4□□□□□ -1.39
BRCC3P46736 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.4□□□□□ -1.39
BRCC3P46736 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
BRCC3P46736 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.39□□□□□ -1.39
BRCC3P46736 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
BRCC3P46736 AC078880.4-201ENST00000617627 1749 ntBASIC6.39□□□□□ -1.39
BRCC3P46736 AC089998.1-201ENST00000548575 3141 ntBASIC6.39□□□□□ -1.39
BRCC3P46736 USP9YP3-201ENST00000434481 1766 ntBASIC6.39□□□□□ -1.39
BRCC3P46736 PARP4P2-201ENST00000446672 3326 ntBASIC6.39□□□□□ -1.39
BRCC3P46736 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
BRCC3P46736 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
BRCC3P46736 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
BRCC3P46736 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
BRCC3P46736 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
BRCC3P46736 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
BRCC3P46736 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
BRCC3P46736 RN7SKP206-201ENST00000410823 293 ntBASIC6.39□□□□□ -1.39
BRCC3P46736 EEF1B2P8-201ENST00000414101 671 ntBASIC6.39□□□□□ -1.39
BRCC3P46736 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.39□□□□□ -1.39
BRCC3P46736 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.39□□□□□ -1.39
BRCC3P46736 AC007562.1-201ENST00000421819 517 ntBASIC6.39□□□□□ -1.39
BRCC3P46736 AC023274.2-201ENST00000445264 521 ntBASIC6.39□□□□□ -1.39
BRCC3P46736 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.39□□□□□ -1.39
BRCC3P46736 AC104164.1-201ENST00000460282 590 ntBASIC6.39□□□□□ -1.39
BRCC3P46736 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.39□□□□□ -1.39
BRCC3P46736 RN7SL57P-201ENST00000493687 290 ntBASIC6.39□□□□□ -1.39
BRCC3P46736 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.39□□□□□ -1.39
BRCC3P46736 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.39□□□□□ -1.39
BRCC3P46736 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.39□□□□□ -1.39
BRCC3P46736 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.39□□□□□ -1.39
BRCC3P46736 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.39□□□□□ -1.39
BRCC3P46736 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.39□□□□□ -1.39
BRCC3P46736 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.39□□□□□ -1.39
BRCC3P46736 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.39□□□□□ -1.39
BRCC3P46736 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.39□□□□□ -1.39
BRCC3P46736 COX6CP7-201ENST00000597056 208 ntBASIC6.39□□□□□ -1.39
BRCC3P46736 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.39□□□□□ -1.39
BRCC3P46736 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
BRCC3P46736 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
BRCC3P46736 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
BRCC3P46736 AC009831.5-201ENST00000624000 3189 ntBASIC6.39□□□□□ -1.39
BRCC3P46736 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
BRCC3P46736 AC106872.5-201ENST00000508856 1416 ntBASIC6.39□□□□□ -1.39
BRCC3P46736 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
BRCC3P46736 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
BRCC3P46736 AC034229.2-201ENST00000566945 2508 ntBASIC6.39□□□□□ -1.39
BRCC3P46736 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
BRCC3P46736 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
BRCC3P46736 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
BRCC3P46736 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
BRCC3P46736 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
BRCC3P46736 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
BRCC3P46736 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
BRCC3P46736 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
BRCC3P46736 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
BRCC3P46736 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
BRCC3P46736 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
BRCC3P46736 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.38□□□□□ -1.39
BRCC3P46736 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.38□□□□□ -1.39
BRCC3P46736 AL445928.1-201ENST00000435545 222 ntBASIC6.38□□□□□ -1.39
BRCC3P46736 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.38□□□□□ -1.39
BRCC3P46736 SUMO2P3-201ENST00000438311 288 ntBASIC6.38□□□□□ -1.39
BRCC3P46736 RPS7P3-201ENST00000443360 580 ntBASIC6.38□□□□□ -1.39
BRCC3P46736 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.38□□□□□ -1.39
BRCC3P46736 SDC4P-201ENST00000453285 601 ntBASIC6.38□□□□□ -1.39
BRCC3P46736 RAB28P2-201ENST00000454299 641 ntBASIC6.38□□□□□ -1.39
BRCC3P46736 NXT1P1-201ENST00000458481 316 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms