Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC244453.4-201ENST00000419150 388 ntBASIC6.84□□□□□ -1.31
CIITAP33076 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CIITAP33076 VN1R110P-201ENST00000438988 971 ntBASIC6.84□□□□□ -1.31
CIITAP33076 DNAJA1P5-201ENST00000440278 943 ntBASIC6.84□□□□□ -1.31
CIITAP33076 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC6.84□□□□□ -1.31
CIITAP33076 VN1R96P-201ENST00000446052 858 ntBASIC6.84□□□□□ -1.31
CIITAP33076 GEMIN2P1-201ENST00000454246 752 ntBASIC6.84□□□□□ -1.31
CIITAP33076 RN7SL352P-201ENST00000466002 277 ntBASIC6.84□□□□□ -1.31
CIITAP33076 AC023245.1-201ENST00000468501 517 ntBASIC6.84□□□□□ -1.31
CIITAP33076 FTH1P8-201ENST00000498161 514 ntBASIC6.84□□□□□ -1.31
CIITAP33076 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.84□□□□□ -1.31
CIITAP33076 AC008429.4-201ENST00000521201 182 ntBASIC6.84□□□□□ -1.31
CIITAP33076 AP003396.4-201ENST00000527574 265 ntBASIC6.84□□□□□ -1.31
CIITAP33076 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.84□□□□□ -1.31
CIITAP33076 AC007494.1-201ENST00000562293 760 ntBASIC6.84□□□□□ -1.31
CIITAP33076 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CIITAP33076 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.84□□□□□ -1.31
CIITAP33076 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.84□□□□□ -1.31
CIITAP33076 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.84□□□□□ -1.31
CIITAP33076 AL136131.3-201ENST00000607600 188 ntBASIC6.84□□□□□ -1.31
CIITAP33076 AP005212.4-201ENST00000614206 710 ntBASIC6.84□□□□□ -1.31
CIITAP33076 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.84□□□□□ -1.31
CIITAP33076 AC138627.1-204ENST00000641894 765 ntBASIC6.84□□□□□ -1.31
CIITAP33076 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CIITAP33076 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CIITAP33076 BRAFP1-201ENST00000445336 2703 ntBASIC6.84□□□□□ -1.32
CIITAP33076 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CIITAP33076 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
CIITAP33076 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.84□□□□□ -1.32
CIITAP33076 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.83□□□□□ -1.32
CIITAP33076 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CIITAP33076 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.83□□□□□ -1.32
CIITAP33076 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
CIITAP33076 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
CIITAP33076 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.83□□□□□ -1.32
CIITAP33076 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CIITAP33076 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.83□□□□□ -1.32
CIITAP33076 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.83□□□□□ -1.32
CIITAP33076 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CIITAP33076 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CIITAP33076 RNA5SP273-201ENST00000362484 113 ntBASIC6.83□□□□□ -1.32
CIITAP33076 RNU6-167P-201ENST00000384292 106 ntBASIC6.83□□□□□ -1.32
CIITAP33076 KIF4CP-201ENST00000422742 1279 ntBASIC6.83□□□□□ -1.32
CIITAP33076 AC245884.2-201ENST00000426257 404 ntBASIC6.83□□□□□ -1.32
CIITAP33076 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.83□□□□□ -1.32
CIITAP33076 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.83□□□□□ -1.32
CIITAP33076 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.83□□□□□ -1.32
CIITAP33076 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.83□□□□□ -1.32
CIITAP33076 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CIITAP33076 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.83□□□□□ -1.32
CIITAP33076 RN7SL193P-201ENST00000491708 276 ntBASIC6.83□□□□□ -1.32
CIITAP33076 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.83□□□□□ -1.32
CIITAP33076 SCARNA18.1-201ENST00000516330 83 ntBASIC6.83□□□□□ -1.32
CIITAP33076 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.83□□□□□ -1.32
CIITAP33076 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.83□□□□□ -1.32
CIITAP33076 NANOGNBP2-201ENST00000544753 553 ntBASIC6.83□□□□□ -1.32
CIITAP33076 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.83□□□□□ -1.32
CIITAP33076 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
CIITAP33076 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.83□□□□□ -1.32
CIITAP33076 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.83□□□□□ -1.32
CIITAP33076 AC018558.5-201ENST00000565840 952 ntBASIC6.83□□□□□ -1.32
CIITAP33076 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CIITAP33076 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CIITAP33076 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.83□□□□□ -1.32
CIITAP33076 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.83□□□□□ -1.32
CIITAP33076 AC004890.3-201ENST00000605566 1095 ntBASIC6.83□□□□□ -1.32
CIITAP33076 AL136097.3-201ENST00000611097 505 ntBASIC6.83□□□□□ -1.32
CIITAP33076 AL359742.1-201ENST00000622497 540 ntBASIC6.83□□□□□ -1.32
CIITAP33076 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.83□□□□□ -1.32
CIITAP33076 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.83□□□□□ -1.32
CIITAP33076 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.83□□□□□ -1.32
CIITAP33076 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.83□□□□□ -1.32
CIITAP33076 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
CIITAP33076 AC012254.3-201ENST00000591183 2117 ntBASIC6.83□□□□□ -1.32
CIITAP33076 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
CIITAP33076 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
CIITAP33076 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
CIITAP33076 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CIITAP33076 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CIITAP33076 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CIITAP33076 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.83□□□□□ -1.32
CIITAP33076 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.83□□□□□ -1.32
CIITAP33076 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CIITAP33076 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
CIITAP33076 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CIITAP33076 AC009779.8-201ENST00000641684 4384 ntBASIC6.83□□□□□ -1.32
CIITAP33076 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CIITAP33076 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.83□□□□□ -1.32
CIITAP33076 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CIITAP33076 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CIITAP33076 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.82□□□□□ -1.32
CIITAP33076 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.82□□□□□ -1.32
CIITAP33076 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
CIITAP33076 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CIITAP33076 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CIITAP33076 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CIITAP33076 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CIITAP33076 RNA5SP477-201ENST00000362639 119 ntBASIC6.82□□□□□ -1.32
CIITAP33076 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.82□□□□□ -1.32
CIITAP33076 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms