Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.33□□□□□ -1.4
HOXA9P31269 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.33□□□□□ -1.4
HOXA9P31269 RPL23AP60-201ENST00000450011 454 ntBASIC6.33□□□□□ -1.4
HOXA9P31269 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXA9P31269 RPS4XP14-201ENST00000493072 781 ntBASIC6.33□□□□□ -1.4
HOXA9P31269 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.33□□□□□ -1.4
HOXA9P31269 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.33□□□□□ -1.4
HOXA9P31269 ATP5LP3-201ENST00000514223 304 ntBASIC6.33□□□□□ -1.4
HOXA9P31269 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.33□□□□□ -1.4
HOXA9P31269 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.33□□□□□ -1.4
HOXA9P31269 OR5D2P-201ENST00000524390 911 ntBASIC6.33□□□□□ -1.4
HOXA9P31269 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.33□□□□□ -1.4
HOXA9P31269 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.33□□□□□ -1.4
HOXA9P31269 SNORD95-201ENST00000579879 68 ntBASIC6.33□□□□□ -1.4
HOXA9P31269 AC018690.1-201ENST00000608144 626 ntBASIC6.33□□□□□ -1.4
HOXA9P31269 MIR6826-201ENST00000617808 98 ntBASIC6.33□□□□□ -1.4
HOXA9P31269 AP001885.1-201ENST00000621658 558 ntBASIC6.33□□□□□ -1.4
HOXA9P31269 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXA9P31269 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXA9P31269 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXA9P31269 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.33□□□□□ -1.4
HOXA9P31269 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXA9P31269 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXA9P31269 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXA9P31269 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXA9P31269 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.33□□□□□ -1.4
HOXA9P31269 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA9P31269 PDZK1P1-202ENST00000425209 1350 ntBASIC6.32□□□□□ -1.4
HOXA9P31269 HDAC1P2-201ENST00000453661 1398 ntBASIC6.32□□□□□ -1.4
HOXA9P31269 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXA9P31269 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA9P31269 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXA9P31269 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA9P31269 AC130360.2-201ENST00000533477 1556 ntBASIC6.32□□□□□ -1.4
HOXA9P31269 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA9P31269 AL117378.2-201ENST00000622916 1337 ntBASIC6.32□□□□□ -1.4
HOXA9P31269 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA9P31269 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA9P31269 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXA9P31269 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA9P31269 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXA9P31269 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
HOXA9P31269 SELENOWP1-201ENST00000322792 252 ntBASIC6.32□□□□□ -1.4
HOXA9P31269 RNA5SP500-201ENST00000364486 119 ntBASIC6.32□□□□□ -1.4
HOXA9P31269 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.32□□□□□ -1.4
HOXA9P31269 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA9P31269 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
HOXA9P31269 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.32□□□□□ -1.4
HOXA9P31269 SUMO2P3-201ENST00000438311 288 ntBASIC6.32□□□□□ -1.4
HOXA9P31269 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXA9P31269 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXA9P31269 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXA9P31269 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
HOXA9P31269 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXA9P31269 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXA9P31269 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXA9P31269 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXA9P31269 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXA9P31269 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXA9P31269 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
HOXA9P31269 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXA9P31269 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXA9P31269 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.32□□□□□ -1.4
HOXA9P31269 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXA9P31269 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXA9P31269 AC022404.1-201ENST00000555320 273 ntBASIC6.32□□□□□ -1.4
HOXA9P31269 RPL12P48-201ENST00000605620 304 ntBASIC6.32□□□□□ -1.4
HOXA9P31269 AL512624.1-201ENST00000613638 469 ntBASIC6.32□□□□□ -1.4
HOXA9P31269 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXA9P31269 AC022726.2-201ENST00000634673 547 ntBASIC6.32□□□□□ -1.4
HOXA9P31269 MIR193BHG-214ENST00000641765 509 ntBASIC6.32□□□□□ -1.4
HOXA9P31269 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA9P31269 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA9P31269 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA9P31269 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA9P31269 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA9P31269 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA9P31269 AP001541.1-201ENST00000623322 1904 ntBASIC6.32□□□□□ -1.4
HOXA9P31269 AC092692.1-201ENST00000623625 2595 ntBASIC6.32□□□□□ -1.4
HOXA9P31269 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA9P31269 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA9P31269 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.32□□□□□ -1.4
HOXA9P31269 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXA9P31269 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HOXA9P31269 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HOXA9P31269 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HOXA9P31269 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HOXA9P31269 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HOXA9P31269 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HOXA9P31269 SHQ1P1-201ENST00000437111 1544 ntBASIC6.31□□□□□ -1.4
HOXA9P31269 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
HOXA9P31269 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
HOXA9P31269 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.31□□□□□ -1.4
HOXA9P31269 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
HOXA9P31269 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
HOXA9P31269 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
HOXA9P31269 AL157831.2-201ENST00000564681 3095 ntBASIC6.31□□□□□ -1.4
HOXA9P31269 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.31□□□□□ -1.4
HOXA9P31269 AL513325.1-201ENST00000417716 1034 ntBASIC6.31□□□□□ -1.4
HOXA9P31269 AK4P4-201ENST00000419465 646 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms