Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 NDUFA5P11-201ENST00000567995 343 ntBASIC6.04□□□□□ -1.44
CAPN1P07384 AC002310.3-201ENST00000569728 723 ntBASIC6.04□□□□□ -1.44
CAPN1P07384 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.04□□□□□ -1.44
CAPN1P07384 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.04□□□□□ -1.44
CAPN1P07384 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.04□□□□□ -1.44
CAPN1P07384 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.04□□□□□ -1.44
CAPN1P07384 AC027334.1-201ENST00000603257 310 ntBASIC6.04□□□□□ -1.44
CAPN1P07384 RPL12P48-201ENST00000605620 304 ntBASIC6.04□□□□□ -1.44
CAPN1P07384 AL080312.2-201ENST00000613001 630 ntBASIC6.04□□□□□ -1.44
CAPN1P07384 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.04□□□□□ -1.44
CAPN1P07384 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.04□□□□□ -1.44
CAPN1P07384 OR7E91P-202ENST00000642062 1198 ntBASIC6.04□□□□□ -1.44
CAPN1P07384 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.04□□□□□ -1.44
CAPN1P07384 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CAPN1P07384 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.04□□□□□ -1.44
CAPN1P07384 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.04□□□□□ -1.44
CAPN1P07384 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CAPN1P07384 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CAPN1P07384 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CAPN1P07384 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CAPN1P07384 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.04□□□□□ -1.44
CAPN1P07384 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.04□□□□□ -1.44
CAPN1P07384 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.04□□□□□ -1.44
CAPN1P07384 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CAPN1P07384 AC140134.1-201ENST00000511830 3544 ntBASIC6.04□□□□□ -1.44
CAPN1P07384 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CAPN1P07384 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CAPN1P07384 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CAPN1P07384 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CAPN1P07384 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CAPN1P07384 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CAPN1P07384 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CAPN1P07384 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.03□□□□□ -1.44
CAPN1P07384 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CAPN1P07384 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CAPN1P07384 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CAPN1P07384 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
CAPN1P07384 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CAPN1P07384 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CAPN1P07384 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
CAPN1P07384 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CAPN1P07384 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CAPN1P07384 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.03□□□□□ -1.44
CAPN1P07384 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CAPN1P07384 SNORA77.2-201ENST00000408571 112 ntBASIC6.03□□□□□ -1.44
CAPN1P07384 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.03□□□□□ -1.44
CAPN1P07384 VN1R3-201ENST00000418822 919 ntBASIC6.03□□□□□ -1.44
CAPN1P07384 RPS7P14-201ENST00000426405 583 ntBASIC6.03□□□□□ -1.44
CAPN1P07384 AC115283.1-201ENST00000427353 400 ntBASIC6.03□□□□□ -1.44
CAPN1P07384 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.03□□□□□ -1.44
CAPN1P07384 AC110602.1-201ENST00000437414 318 ntBASIC6.03□□□□□ -1.44
CAPN1P07384 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CAPN1P07384 AL136455.1-201ENST00000441083 1240 ntBASIC6.03□□□□□ -1.44
CAPN1P07384 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.03□□□□□ -1.44
CAPN1P07384 AC114728.1-201ENST00000488289 483 ntBASIC6.03□□□□□ -1.44
CAPN1P07384 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.03□□□□□ -1.44
CAPN1P07384 AC108103.1-201ENST00000511286 446 ntBASIC6.03□□□□□ -1.44
CAPN1P07384 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.03□□□□□ -1.44
CAPN1P07384 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.03□□□□□ -1.44
CAPN1P07384 AC021733.2-201ENST00000518830 497 ntBASIC6.03□□□□□ -1.44
CAPN1P07384 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.03□□□□□ -1.44
CAPN1P07384 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.03□□□□□ -1.44
CAPN1P07384 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.03□□□□□ -1.44
CAPN1P07384 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
CAPN1P07384 AC005726.4-201ENST00000582858 458 ntBASIC6.03□□□□□ -1.44
CAPN1P07384 AC079315.1-201ENST00000602952 623 ntBASIC6.03□□□□□ -1.44
CAPN1P07384 MIR6861-201ENST00000618657 64 ntBASIC6.03□□□□□ -1.44
CAPN1P07384 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.03□□□□□ -1.44
CAPN1P07384 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.03□□□□□ -1.44
CAPN1P07384 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.03□□□□□ -1.44
CAPN1P07384 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.03□□□□□ -1.44
CAPN1P07384 AC132825.8-201ENST00000640783 297 ntBASIC6.03□□□□□ -1.44
CAPN1P07384 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CAPN1P07384 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CAPN1P07384 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CAPN1P07384 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CAPN1P07384 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
CAPN1P07384 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CAPN1P07384 QRSL1P1-201ENST00000400977 1540 ntBASIC6.03□□□□□ -1.44
CAPN1P07384 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.03□□□□□ -1.44
CAPN1P07384 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CAPN1P07384 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CAPN1P07384 NLRP3P1-201ENST00000622303 1785 ntBASIC6.03□□□□□ -1.44
CAPN1P07384 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.03□□□□□ -1.44
CAPN1P07384 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CAPN1P07384 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.03□□□□□ -1.44
CAPN1P07384 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CAPN1P07384 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.44
CAPN1P07384 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.44
CAPN1P07384 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.02□□□□□ -1.44
CAPN1P07384 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.02□□□□□ -1.44
CAPN1P07384 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CAPN1P07384 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CAPN1P07384 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CAPN1P07384 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CAPN1P07384 AL442128.2-201ENST00000620246 1824 ntBASIC6.02□□□□□ -1.45
CAPN1P07384 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CAPN1P07384 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CAPN1P07384 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CAPN1P07384 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms