Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM1O00151 AL449283.1-201ENST00000602631 3403 ntBASIC5.86□□□□□ -1.47
PDLIM1O00151 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PDLIM1O00151 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDLIM1O00151 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PDLIM1O00151 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
PDLIM1O00151 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PDLIM1O00151 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDLIM1O00151 OR7A2P-201ENST00000304105 930 ntBASIC5.85□□□□□ -1.47
PDLIM1O00151 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDLIM1O00151 U3.7-201ENST00000363668 216 ntBASIC5.85□□□□□ -1.47
PDLIM1O00151 VIM2P-201ENST00000402383 1294 ntBASIC5.85□□□□□ -1.47
PDLIM1O00151 AC002524.1-201ENST00000411687 547 ntBASIC5.85□□□□□ -1.47
PDLIM1O00151 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM1O00151 FAM183DP-201ENST00000421987 399 ntBASIC5.85□□□□□ -1.47
PDLIM1O00151 AL354707.3-201ENST00000427308 331 ntBASIC5.85□□□□□ -1.47
PDLIM1O00151 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDLIM1O00151 AC073410.1-201ENST00000435125 589 ntBASIC5.85□□□□□ -1.47
PDLIM1O00151 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM1O00151 AC128677.1-201ENST00000436016 442 ntBASIC5.85□□□□□ -1.47
PDLIM1O00151 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM1O00151 AC013403.1-201ENST00000436954 263 ntBASIC5.85□□□□□ -1.47
PDLIM1O00151 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM1O00151 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM1O00151 COL11A2P1-205ENST00000441798 676 ntBASIC5.85□□□□□ -1.47
PDLIM1O00151 AL356121.1-201ENST00000442911 156 ntBASIC5.85□□□□□ -1.47
PDLIM1O00151 GAPDHP33-201ENST00000443168 1013 ntBASIC5.85□□□□□ -1.47
PDLIM1O00151 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.85□□□□□ -1.47
PDLIM1O00151 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM1O00151 RN7SL393P-201ENST00000463588 296 ntBASIC5.85□□□□□ -1.47
PDLIM1O00151 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.85□□□□□ -1.47
PDLIM1O00151 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM1O00151 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM1O00151 MRPS5P3-201ENST00000515577 166 ntBASIC5.85□□□□□ -1.47
PDLIM1O00151 RNA5SP400-201ENST00000517155 111 ntBASIC5.85□□□□□ -1.47
PDLIM1O00151 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.85□□□□□ -1.47
PDLIM1O00151 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.85□□□□□ -1.47
PDLIM1O00151 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDLIM1O00151 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.85□□□□□ -1.47
PDLIM1O00151 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
PDLIM1O00151 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM1O00151 BMS1P16-201ENST00000556075 1147 ntBASIC5.85□□□□□ -1.47
PDLIM1O00151 AC026956.1-201ENST00000558741 396 ntBASIC5.85□□□□□ -1.47
PDLIM1O00151 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.85□□□□□ -1.47
PDLIM1O00151 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM1O00151 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.85□□□□□ -1.47
PDLIM1O00151 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM1O00151 AC024267.2-201ENST00000582737 417 ntBASIC5.85□□□□□ -1.47
PDLIM1O00151 AC005479.3-201ENST00000602790 431 ntBASIC5.85□□□□□ -1.47
PDLIM1O00151 AC004890.3-201ENST00000605566 1095 ntBASIC5.85□□□□□ -1.47
PDLIM1O00151 MIR7854-201ENST00000620068 65 ntBASIC5.85□□□□□ -1.47
PDLIM1O00151 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.85□□□□□ -1.47
PDLIM1O00151 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.85□□□□□ -1.47
PDLIM1O00151 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.85□□□□□ -1.47
PDLIM1O00151 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.85□□□□□ -1.47
PDLIM1O00151 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDLIM1O00151 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.85□□□□□ -1.47
PDLIM1O00151 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.84□□□□□ -1.47
PDLIM1O00151 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM1O00151 AP005432.1-201ENST00000580891 3485 ntBASIC5.84□□□□□ -1.47
PDLIM1O00151 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
PDLIM1O00151 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM1O00151 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM1O00151 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
PDLIM1O00151 MTCO1P46-201ENST00000451639 1491 ntBASIC5.84□□□□□ -1.47
PDLIM1O00151 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM1O00151 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM1O00151 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM1O00151 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM1O00151 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM1O00151 AC016583.1-201ENST00000624221 2431 ntBASIC5.84□□□□□ -1.47
PDLIM1O00151 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM1O00151 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM1O00151 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM1O00151 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.84□□□□□ -1.47
PDLIM1O00151 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.84□□□□□ -1.47
PDLIM1O00151 AL034417.1-201ENST00000399343 800 ntBASIC5.84□□□□□ -1.47
PDLIM1O00151 AL033519.1-201ENST00000407266 307 ntBASIC5.84□□□□□ -1.47
PDLIM1O00151 UBTFL2-201ENST00000411859 1191 ntBASIC5.84□□□□□ -1.47
PDLIM1O00151 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.84□□□□□ -1.47
PDLIM1O00151 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM1O00151 GAPDHP37-201ENST00000442317 968 ntBASIC5.84□□□□□ -1.47
PDLIM1O00151 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.84□□□□□ -1.47
PDLIM1O00151 VPS25P1-201ENST00000455691 508 ntBASIC5.84□□□□□ -1.47
PDLIM1O00151 AC073594.1-201ENST00000462065 364 ntBASIC5.84□□□□□ -1.47
PDLIM1O00151 OR9A1P-202ENST00000484361 945 ntBASIC5.84□□□□□ -1.47
PDLIM1O00151 RPL19P11-201ENST00000495944 589 ntBASIC5.84□□□□□ -1.47
PDLIM1O00151 RPSAP51-201ENST00000497462 645 ntBASIC5.84□□□□□ -1.47
PDLIM1O00151 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.84□□□□□ -1.47
PDLIM1O00151 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.84□□□□□ -1.47
PDLIM1O00151 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.84□□□□□ -1.47
PDLIM1O00151 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.84□□□□□ -1.47
PDLIM1O00151 COX6B1P4-201ENST00000519826 484 ntBASIC5.84□□□□□ -1.47
PDLIM1O00151 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.84□□□□□ -1.47
PDLIM1O00151 OR9G2P-201ENST00000533326 880 ntBASIC5.84□□□□□ -1.47
PDLIM1O00151 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.84□□□□□ -1.47
PDLIM1O00151 AC027229.1-201ENST00000583887 253 ntBASIC5.84□□□□□ -1.47
PDLIM1O00151 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.84□□□□□ -1.47
PDLIM1O00151 MIR132-201ENST00000591554 101 ntBASIC5.84□□□□□ -1.47
PDLIM1O00151 AC114477.1-201ENST00000605097 605 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms