Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LINC01616-201ENST00000561816 2280 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AC018717.1-201ENST00000457712 1505 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AL133243.2-201ENST00000610331 1621 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 RNA5SP110-201ENST00000362638 115 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 MIR323B-201ENST00000385269 82 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AL353626.3-201ENST00000413399 657 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 RPS7P14-201ENST00000426405 583 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AL353662.1-201ENST00000439099 327 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 PPIAP27-201ENST00000453800 265 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 MTCYBP14-201ENST00000457471 715 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 LSM3P4-201ENST00000502948 309 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AC147055.1-201ENST00000509261 750 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 RN7SKP238-201ENST00000516483 249 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 RNU6-551P-201ENST00000516661 103 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 IGKV3D-25-201ENST00000519599 235 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 EIF1AXP2-201ENST00000555940 413 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AC009303.3-201ENST00000591103 736 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AP001823.1-201ENST00000604056 1003 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AC096586.2-201ENST00000610260 441 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AC022106.1-201ENST00000612834 766 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 AC018628.1-201ENST00000624147 3819 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 BIN2P1-201ENST00000504996 1530 ntBASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AL353763.1-201ENST00000624467 1628 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AC112243.1-201ENST00000623949 3851 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AP000866.6-201ENST00000638898 3579 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AP000547.3-204ENST00000588548 2523 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 SNORD8-201ENST00000363915 110 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 MIR130B-202ENST00000385018 82 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 MTND4LP17-201ENST00000414607 293 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 CYP4F30P-202ENST00000420048 405 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 RPL34P27-201ENST00000428810 349 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AC023141.3-201ENST00000436698 278 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms