Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 LYARP1-201ENST00000436977 1501 ntBASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 FHL1-230ENST00000630084 1335 ntTSL 2 BASIC7.78□□□□□ -1.16
PCDHB11Q9Y5F2 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.16
PCDHB11Q9Y5F2 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
PCDHB11Q9Y5F2 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 CDY11P-201ENST00000447168 1651 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 SNORA30-201ENST00000384028 129 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 AC013404.1-201ENST00000413068 249 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 CRIP1P3-201ENST00000416794 220 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 EEF1A1P27-201ENST00000429983 1135 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 Z98752.2-201ENST00000432727 312 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 FMO7P-201ENST00000436045 768 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 AC019185.3-201ENST00000438805 323 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 ARL2BPP7-201ENST00000446421 490 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 RPL7P14-201ENST00000449851 741 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 CTSLP6-201ENST00000458273 1002 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 AC013828.1-201ENST00000481845 158 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 RN7SL201P-201ENST00000482306 296 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 DYNLL1P6-201ENST00000503440 264 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 PTGES3P3-201ENST00000511479 482 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 MTCO1P35-201ENST00000515270 228 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 NTAN1P2-201ENST00000515730 940 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 RNU6-1153P-201ENST00000516760 105 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 OR4A11P-201ENST00000529557 906 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 AC006065.2-201ENST00000536978 211 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 MRPL40P1-201ENST00000542687 604 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 AC063977.5-201ENST00000601044 974 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 AL390838.2-201ENST00000602394 274 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 AP001836.1-201ENST00000604675 523 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 AC024614.3-201ENST00000637860 256 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 AL139811.2-201ENST00000373465 1630 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 CASC19-243ENST00000641588 1546 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 ZNF887P-201ENST00000431363 1407 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 AL121835.2-201ENST00000624253 3502 ntBASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PCDHB11Q9Y5F2 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 HSD11B1-203ENST00000367028 1461 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 SPATA2P1-201ENST00000431223 2055 ntBASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 RPL21P132-201ENST00000331267 462 ntBASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 RN7SKP59-201ENST00000410520 314 ntBASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 RPS20P15-201ENST00000412792 311 ntBASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 EEF1A1P40-201ENST00000412883 573 ntBASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 HMGB3P23-201ENST00000414981 585 ntBASIC7.76□□□□□ -1.17
PCDHB11Q9Y5F2 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms