Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 ERG-210ENST00000442448 5034 ntTSL 5 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 CD180-201ENST00000256447 5388 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 CAGE1-202ENST00000338150 2771 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AL031864.1-201ENST00000392075 423 ntBASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 MIR1306-201ENST00000408439 85 ntBASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 RNU6-1304P-201ENST00000411374 106 ntBASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AC244157.1-201ENST00000415642 163 ntBASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 BPI-202ENST00000417318 1082 ntTSL 5 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AL355526.1-201ENST00000420347 215 ntTSL 5 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 RPL34P27-201ENST00000428810 349 ntBASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AL353093.1-201ENST00000441292 436 ntBASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 RPL17P49-201ENST00000443728 411 ntBASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 GRPEL2P3-201ENST00000448626 640 ntBASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AC105393.1-202ENST00000449621 598 ntTSL 3 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AC104306.1-201ENST00000449702 371 ntBASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 RPL26P28-201ENST00000451325 435 ntBASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AL357874.2-201ENST00000457044 679 ntTSL 3 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AC078785.3-201ENST00000476607 425 ntBASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 RN7SL316P-201ENST00000483452 272 ntBASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 RN7SL236P-201ENST00000484759 284 ntBASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 RNU6-635P-201ENST00000516651 102 ntBASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 DEFB131D-201ENST00000526803 184 ntBASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 SMAD3-203ENST00000537194 1147 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AP003108.2-208ENST00000543044 883 ntTSL 3 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AC006927.1-201ENST00000544818 498 ntBASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AC090115.1-201ENST00000548257 562 ntTSL 4 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AC137800.1-202ENST00000562098 446 ntBASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AL049634.2-203ENST00000564763 588 ntAPPRIS ALT2 TSL 4 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AC015909.4-201ENST00000577175 578 ntTSL 4 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AC010327.2-201ENST00000587647 488 ntBASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AC100843.3-201ENST00000591796 259 ntBASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AC008957.2-201ENST00000618632 396 ntTSL 5 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AC009120.2-201ENST00000620711 522 ntTSL 3 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 LINC01206-219ENST00000625703 820 ntTSL 5 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 SCYL2-211ENST00000635101 3948 ntTSL 5 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 SERPINB2-201ENST00000299502 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 RAD9B-203ENST00000409246 2794 ntTSL 2 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 AC055716.2-201ENST00000552545 2441 ntBASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 SEPT4-211ENST00000579371 1362 ntTSL 5 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
PCDHB13Q9Y5F0 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 WDPCP-206ENST00000409562 3544 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 ARNTL2-201ENST00000261178 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 BTN2A3P-201ENST00000377662 1836 ntBASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 AC026124.1-201ENST00000545709 3457 ntTSL 5 BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 CPEB1-AS1-202ENST00000618020 2994 ntBASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 ESCO2-201ENST00000305188 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 ELP3-202ENST00000380353 3078 ntTSL 2 BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 RNF138-201ENST00000257190 2071 ntTSL 2 BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 KRTAP11-1-201ENST00000332378 912 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 RNA5SP74-201ENST00000363538 109 ntBASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 CUBN-201ENST00000377823 705 ntTSL 3 BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 RNU6-831P-201ENST00000384548 107 ntBASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 FCAR-207ENST00000391725 830 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 IGKV1OR9-1-201ENST00000424370 284 ntBASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 Z97634.1-203ENST00000435229 471 ntBASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 BNIP3P2-201ENST00000441221 577 ntBASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 DNAJC19P8-201ENST00000452887 259 ntBASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 SNORA48.10-201ENST00000516965 160 ntBASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 AC022861.1-201ENST00000522981 663 ntBASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 GTF2IP11-201ENST00000526931 420 ntBASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 APOOP3-201ENST00000536787 586 ntBASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 HNRNPC-227ENST00000556897 1252 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC9.61□□□□□ -0.87
PCDHB13Q9Y5F0 AC022149.1-201ENST00000596032 609 ntBASIC9.61□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms