Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 GNG2-215ENST00000557376 573 ntTSL 4 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 RPS3AP23-202ENST00000574601 686 ntBASIC10.35□□□□□ -0.75
PHF8Q9UPP1 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 AC005518.2-201ENST00000603254 282 ntBASIC10.35□□□□□ -0.75
PHF8Q9UPP1 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 SUMO2P14-201ENST00000604488 293 ntBASIC10.35□□□□□ -0.75
PHF8Q9UPP1 AC011373.1-201ENST00000607270 237 ntBASIC10.35□□□□□ -0.75
PHF8Q9UPP1 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 AC018816.2-201ENST00000621460 353 ntBASIC10.35□□□□□ -0.75
PHF8Q9UPP1 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 JAML-213ENST00000640745 951 ntTSL 5 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 NEMP1-202ENST00000379391 5370 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 ZNF35-202ENST00000396056 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 MAP3K7CL-202ENST00000339024 2066 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 MAP3K7CL-208ENST00000399935 2093 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 STARD4-212ENST00000512160 3500 ntTSL 2 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 AC021054.1-201ENST00000537514 2338 ntTSL 2 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 TARS-202ENST00000455217 2523 ntTSL 2 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 EEF1GP6-201ENST00000402309 905 ntBASIC10.34□□□□□ -0.75
PHF8Q9UPP1 GSTA12P-201ENST00000402398 508 ntBASIC10.34□□□□□ -0.75
PHF8Q9UPP1 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 AC092042.2-201ENST00000417304 331 ntBASIC10.34□□□□□ -0.75
PHF8Q9UPP1 RNGTTP1-201ENST00000420965 728 ntBASIC10.34□□□□□ -0.75
PHF8Q9UPP1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 TIMM9P3-201ENST00000428659 274 ntBASIC10.34□□□□□ -0.75
PHF8Q9UPP1 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 RPL5P24-201ENST00000463742 885 ntBASIC10.34□□□□□ -0.75
PHF8Q9UPP1 MTND1P16-201ENST00000465177 898 ntBASIC10.34□□□□□ -0.75
PHF8Q9UPP1 AC015820.1-201ENST00000473882 321 ntBASIC10.34□□□□□ -0.75
PHF8Q9UPP1 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 HNRNPA1P44-201ENST00000503999 879 ntBASIC10.34□□□□□ -0.75
PHF8Q9UPP1 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 OR4C7P-201ENST00000533375 919 ntBASIC10.34□□□□□ -0.75
PHF8Q9UPP1 AC093012.1-202ENST00000549403 582 ntBASIC10.34□□□□□ -0.75
PHF8Q9UPP1 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 AL121821.2-201ENST00000556081 394 ntBASIC10.34□□□□□ -0.75
PHF8Q9UPP1 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 ULK4P2-202ENST00000564187 492 ntBASIC10.34□□□□□ -0.75
PHF8Q9UPP1 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 AC006967.3-201ENST00000594086 1093 ntBASIC10.34□□□□□ -0.75
PHF8Q9UPP1 AC092960.1-201ENST00000604762 351 ntBASIC10.34□□□□□ -0.75
PHF8Q9UPP1 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC10.34□□□□□ -0.75
PHF8Q9UPP1 AL160413.1-201ENST00000622780 310 ntBASIC10.34□□□□□ -0.75
PHF8Q9UPP1 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 AC135068.11-201ENST00000636378 921 ntBASIC10.34□□□□□ -0.75
PHF8Q9UPP1 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 ZWILCH-201ENST00000307897 3960 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 OR2A4-201ENST00000315453 1758 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 BBS9-204ENST00000396127 3914 ntTSL 5 BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
PHF8Q9UPP1 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 IFIT1P1-201ENST00000400497 1449 ntBASIC10.33□□□□□ -0.76
PHF8Q9UPP1 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 TMEM106A-208ENST00000612339 3266 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 DNAH10-209ENST00000614082 3484 ntTSL 5 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 ANKUB1-201ENST00000446160 2419 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms