Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 RNU11-6P-201ENST00000391127 133 ntBASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 LYPLA1P3-201ENST00000402650 695 ntBASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 AC245096.1-201ENST00000413104 546 ntBASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 ZNF619P1-201ENST00000446539 752 ntBASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 FTLP8-201ENST00000446770 267 ntBASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 AC073594.1-201ENST00000462065 364 ntBASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 AC090568.1-201ENST00000509499 856 ntBASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 AC006499.4-201ENST00000510947 694 ntBASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 RNA5SP400-201ENST00000517155 111 ntBASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 MIR3189-201ENST00000578735 73 ntBASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 AL096712.1-201ENST00000614561 159 ntBASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 SHQ1P1-201ENST00000437111 1544 ntBASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 MTCO1P28-201ENST00000574177 1528 ntBASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 CASC19-238ENST00000641523 1558 ntBASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.2□□□□□ -1.26
CLIP2Q9UDT6 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 RNFT1P3-201ENST00000340898 1052 ntBASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 AL096829.1-201ENST00000413677 457 ntBASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 RPS26P38-201ENST00000414476 348 ntBASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 IPPKP1-201ENST00000422501 768 ntBASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 AL359839.1-201ENST00000451975 1160 ntBASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 AC103563.5-201ENST00000455643 364 ntBASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 OR4A40P-201ENST00000533878 948 ntBASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 AC007956.1-201ENST00000555623 542 ntBASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 OR4H6P-201ENST00000563771 921 ntBASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 AP005119.1-201ENST00000580956 292 ntBASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 AC245014.3-201ENST00000618589 347 ntBASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 AL137067.2-201ENST00000621202 131 ntBASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 FO681491.1-202ENST00000623392 737 ntBASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 AC119674.1-202ENST00000641333 1860 ntBASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 AL731532.1-201ENST00000623972 4236 ntBASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
CLIP2Q9UDT6 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 RNA5SP273-201ENST00000362484 113 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms