Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 AC004232.2-201ENST00000574245 821 ntBASIC6.27□□□□□ -1.41
PCDH9Q9HC56 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 AL136097.3-201ENST00000611097 505 ntBASIC6.27□□□□□ -1.41
PCDH9Q9HC56 AC022106.1-201ENST00000612834 766 ntBASIC6.27□□□□□ -1.41
PCDH9Q9HC56 NF1P10-201ENST00000613227 742 ntBASIC6.27□□□□□ -1.41
PCDH9Q9HC56 AL357153.4-201ENST00000620487 1016 ntBASIC6.27□□□□□ -1.41
PCDH9Q9HC56 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 PPBPP2-201ENST00000513150 1362 ntBASIC6.27□□□□□ -1.41
PCDH9Q9HC56 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDH9Q9HC56 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 NPM1P38-201ENST00000403835 865 ntBASIC6.26□□□□□ -1.41
PCDH9Q9HC56 AL035422.1-201ENST00000414193 397 ntBASIC6.26□□□□□ -1.41
PCDH9Q9HC56 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 AC092865.3-201ENST00000425390 1026 ntBASIC6.26□□□□□ -1.41
PCDH9Q9HC56 AC244033.1-201ENST00000426826 870 ntBASIC6.26□□□□□ -1.41
PCDH9Q9HC56 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 AC108479.1-201ENST00000431142 427 ntBASIC6.26□□□□□ -1.41
PCDH9Q9HC56 NFYAP1-201ENST00000431953 972 ntBASIC6.26□□□□□ -1.41
PCDH9Q9HC56 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 AL590004.3-202ENST00000445883 451 ntBASIC6.26□□□□□ -1.41
PCDH9Q9HC56 TIMM8BP2-201ENST00000445940 251 ntBASIC6.26□□□□□ -1.41
PCDH9Q9HC56 RPL23AP40-201ENST00000487630 390 ntBASIC6.26□□□□□ -1.41
PCDH9Q9HC56 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 AC108103.1-201ENST00000511286 446 ntBASIC6.26□□□□□ -1.41
PCDH9Q9HC56 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 GTF2IP11-201ENST00000526931 420 ntBASIC6.26□□□□□ -1.41
PCDH9Q9HC56 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 AP005136.2-201ENST00000583253 1049 ntBASIC6.26□□□□□ -1.41
PCDH9Q9HC56 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 SMIM12P1-201ENST00000603004 274 ntBASIC6.26□□□□□ -1.41
PCDH9Q9HC56 AP001823.1-201ENST00000604056 1003 ntBASIC6.26□□□□□ -1.41
PCDH9Q9HC56 uc_338.31-201ENST00000615595 186 ntBASIC6.26□□□□□ -1.41
PCDH9Q9HC56 MIR6721-201ENST00000617181 87 ntBASIC6.26□□□□□ -1.41
PCDH9Q9HC56 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 AC009120.7-201ENST00000623452 780 ntBASIC6.26□□□□□ -1.41
PCDH9Q9HC56 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH9Q9HC56 EIF3EP1-201ENST00000433978 1316 ntBASIC6.25□□□□□ -1.41
PCDH9Q9HC56 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 RNA5SP279-201ENST00000365513 117 ntBASIC6.25□□□□□ -1.41
PCDH9Q9HC56 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 RN7SKP108-201ENST00000411367 328 ntBASIC6.25□□□□□ -1.41
PCDH9Q9HC56 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 AL590399.2-201ENST00000427536 309 ntBASIC6.25□□□□□ -1.41
PCDH9Q9HC56 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 AC012497.1-201ENST00000429392 575 ntBASIC6.25□□□□□ -1.41
PCDH9Q9HC56 PSMD10P2-201ENST00000432890 672 ntBASIC6.25□□□□□ -1.41
PCDH9Q9HC56 OR3D1P-201ENST00000438288 955 ntBASIC6.25□□□□□ -1.41
PCDH9Q9HC56 KRT8P51-201ENST00000438938 274 ntBASIC6.25□□□□□ -1.41
PCDH9Q9HC56 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms