Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 CYP4F27P-201ENST00000514557 494 ntBASIC6□□□□□ -1.45
BRF2Q9HAW0 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6□□□□□ -1.45
BRF2Q9HAW0 AC135983.3-201ENST00000528049 1226 ntBASIC6□□□□□ -1.45
BRF2Q9HAW0 TDGP1-201ENST00000543961 1229 ntBASIC6□□□□□ -1.45
BRF2Q9HAW0 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6□□□□□ -1.45
BRF2Q9HAW0 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6□□□□□ -1.45
BRF2Q9HAW0 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6□□□□□ -1.45
BRF2Q9HAW0 AC007494.1-201ENST00000562293 760 ntBASIC6□□□□□ -1.45
BRF2Q9HAW0 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6□□□□□ -1.45
BRF2Q9HAW0 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6□□□□□ -1.45
BRF2Q9HAW0 AC024267.2-201ENST00000582737 417 ntBASIC6□□□□□ -1.45
BRF2Q9HAW0 AC067838.1-201ENST00000606064 577 ntBASIC6□□□□□ -1.45
BRF2Q9HAW0 AL356094.1-201ENST00000624663 1212 ntBASIC6□□□□□ -1.45
BRF2Q9HAW0 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6□□□□□ -1.45
BRF2Q9HAW0 OFD1P15Y-201ENST00000411536 1392 ntBASIC6□□□□□ -1.45
BRF2Q9HAW0 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
BRF2Q9HAW0 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6□□□□□ -1.45
BRF2Q9HAW0 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6□□□□□ -1.45
BRF2Q9HAW0 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6□□□□□ -1.45
BRF2Q9HAW0 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
BRF2Q9HAW0 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6□□□□□ -1.45
BRF2Q9HAW0 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
BRF2Q9HAW0 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
BRF2Q9HAW0 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 AL359091.1-201ENST00000449048 1734 ntBASIC5.99□□□□□ -1.45
BRF2Q9HAW0 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 RNA5SP485-201ENST00000365053 119 ntBASIC5.99□□□□□ -1.45
BRF2Q9HAW0 SNORA70.9-201ENST00000384370 135 ntBASIC5.99□□□□□ -1.45
BRF2Q9HAW0 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 PTP4A1P1-201ENST00000420539 515 ntBASIC5.99□□□□□ -1.45
BRF2Q9HAW0 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 GLUD1P9-201ENST00000420997 1173 ntBASIC5.99□□□□□ -1.45
BRF2Q9HAW0 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 GAPDHP75-201ENST00000433910 943 ntBASIC5.99□□□□□ -1.45
BRF2Q9HAW0 MRPS33P4-201ENST00000434892 317 ntBASIC5.99□□□□□ -1.45
BRF2Q9HAW0 SOCS5P1-201ENST00000440415 949 ntBASIC5.99□□□□□ -1.45
BRF2Q9HAW0 OR2L9P-201ENST00000444456 913 ntBASIC5.99□□□□□ -1.45
BRF2Q9HAW0 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 GM2AP2-201ENST00000491764 562 ntBASIC5.99□□□□□ -1.45
BRF2Q9HAW0 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 OR4D12P-201ENST00000509361 911 ntBASIC5.99□□□□□ -1.45
BRF2Q9HAW0 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 RN7SKP34-201ENST00000516142 244 ntBASIC5.99□□□□□ -1.45
BRF2Q9HAW0 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 RPL21P136-201ENST00000605378 396 ntBASIC5.99□□□□□ -1.45
BRF2Q9HAW0 MIR6811-201ENST00000620409 58 ntBASIC5.99□□□□□ -1.45
BRF2Q9HAW0 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 AC005225.5-201ENST00000623547 2225 ntBASIC5.99□□□□□ -1.45
BRF2Q9HAW0 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
BRF2Q9HAW0 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 SNORA27.3-201ENST00000364937 134 ntBASIC5.98□□□□□ -1.45
BRF2Q9HAW0 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 AL451142.1-201ENST00000375867 775 ntBASIC5.98□□□□□ -1.45
BRF2Q9HAW0 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 RN7SKP121-201ENST00000410842 305 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms