| MUC4 | Q99102 | CAPRIN2-202 | ENST00000395805 | 4156 nt | TSL 1 (best) BASIC | 4.5 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | ZNF160-203 | ENST00000429604 | 4336 nt | APPRIS P1 TSL 3 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | EXD1-201 | ENST00000314992 | 2942 nt | APPRIS P3 TSL 1 (best) BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | POU2F1-202 | ENST00000367862 | 14038 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | CHD2-202 | ENST00000420239 | 2221 nt | TSL 1 (best) BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | ZNF675-201 | ENST00000359788 | 2301 nt | APPRIS P1 TSL 1 (best) BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | TRMT13-202 | ENST00000370141 | 3129 nt | APPRIS P1 TSL 1 (best) BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | NFE2L2-206 | ENST00000446151 | 2399 nt | APPRIS P1 TSL 1 (best) BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | FBXW12-201 | ENST00000296438 | 1647 nt | APPRIS P3 TSL 1 (best) BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | EDA2R-204 | ENST00000451436 | 3464 nt | APPRIS P3 TSL 5 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | PUS3-203 | ENST00000530811 | 1792 nt | APPRIS P1 TSL 1 (best) BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | CERS3-203 | ENST00000538112 | 1856 nt | APPRIS P1 TSL 1 (best) BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | MAPK10-341 | ENST00000641657 | 3860 nt | APPRIS P2 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | ADAM5-208 | ENST00000505455 | 1998 nt | TSL 1 (best) BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | CLEC12B-202 | ENST00000396502 | 3029 nt | TSL 1 (best) BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | SEC61A2-202 | ENST00000304267 | 2030 nt | TSL 2 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | FAR2-201 | ENST00000182377 | 2095 nt | APPRIS P1 TSL 1 (best) BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | NLN-202 | ENST00000502464 | 8354 nt | TSL 5 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AC092828.1-201 | ENST00000501211 | 5391 nt | TSL 1 (best) BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | RYR3-209 | ENST00000634418 | 15078 nt | APPRIS ALT2 TSL 5 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | BCORP1-202 | ENST00000441139 | 3461 nt | TSL 2 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | RPL39P5-201 | ENST00000273411 | 449 nt | TSL 1 (best) BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | OR9K1P-201 | ENST00000326513 | 941 nt | BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | RNU1-49P-201 | ENST00000363468 | 159 nt | BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | OR5D16-201 | ENST00000378396 | 987 nt | APPRIS P1 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | LIX1L-AS1-202 | ENST00000412239 | 570 nt | TSL 2 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AC096669.1-201 | ENST00000422203 | 648 nt | TSL 5 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AL158817.1-201 | ENST00000422310 | 933 nt | TSL 3 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AC244035.2-201 | ENST00000425896 | 630 nt | TSL 3 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AC092651.1-201 | ENST00000426110 | 312 nt | BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | OR3D1P-201 | ENST00000438288 | 955 nt | BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AMYP1-201 | ENST00000440059 | 1023 nt | BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | MIR205HG-206 | ENST00000440276 | 539 nt | TSL 5 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AC006947.1-201 | ENST00000457168 | 484 nt | TSL 3 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | RN7SL515P-201 | ENST00000463999 | 297 nt | BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | RN7SL413P-201 | ENST00000482700 | 297 nt | BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | SNX18P24-201 | ENST00000505249 | 671 nt | BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | LINC02485-202 | ENST00000511899 | 770 nt | TSL 3 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | SNORD46.2-201 | ENST00000516021 | 102 nt | BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | SUMO2P19-201 | ENST00000518920 | 295 nt | BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AP006245.2-201 | ENST00000522004 | 300 nt | BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AC018442.2-201 | ENST00000523658 | 648 nt | TSL 3 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AC091564.3-201 | ENST00000527398 | 429 nt | TSL 3 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AC135983.3-201 | ENST00000528049 | 1226 nt | BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AC069234.2-202 | ENST00000535720 | 583 nt | TSL 5 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AP001858.2-201 | ENST00000536213 | 601 nt | BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AC078814.2-201 | ENST00000552996 | 535 nt | TSL 4 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AP005209.1-201 | ENST00000582531 | 928 nt | TSL 5 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AC026898.1-201 | ENST00000586404 | 571 nt | BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AL512624.1-201 | ENST00000613638 | 469 nt | BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | CKLF-CMTM1-206 | ENST00000616804 | 678 nt | APPRIS ALT2 TSL 2 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AC103703.1-201 | ENST00000634783 | 663 nt | BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | TTC33-206 | ENST00000636863 | 1149 nt | TSL 5 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AL354854.1-201 | ENST00000455940 | 1363 nt | BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AC114876.1-201 | ENST00000490962 | 1366 nt | BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | RBMS2-202 | ENST00000542360 | 1484 nt | TSL 2 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | WDR72-203 | ENST00000557913 | 5900 nt | APPRIS ALT1 TSL 5 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | CACNB4-234 | ENST00000636785 | 3787 nt | TSL 5 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | SLC4A10-202 | ENST00000375514 | 5710 nt | APPRIS ALT1 TSL 2 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | GABRG2-228 | ENST00000640985 | 3086 nt | TSL 5 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | CCDC186-203 | ENST00000369287 | 7245 nt | APPRIS P1 TSL 1 (best) BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | NBPF20-205 | ENST00000622803 | 3689 nt | TSL 5 BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | DOCK11P1-201 | ENST00000553480 | 5932 nt | BASIC | 4.49 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | IGSF6-201 | ENST00000268389 | 2785 nt | APPRIS P1 TSL 1 (best) BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | CHN1-201 | ENST00000295497 | 2047 nt | TSL 1 (best) BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | TMEM202-201 | ENST00000341689 | 1012 nt | APPRIS P2 TSL 5 BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | IFNA10-201 | ENST00000357374 | 963 nt | APPRIS P1 BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | KLHL4-201 | ENST00000373114 | 2445 nt | TSL 1 (best) BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | NRCAM-203 | ENST00000379024 | 5782 nt | TSL 1 (best) BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | OR2W4P-201 | ENST00000406496 | 926 nt | BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AC016027.5-201 | ENST00000427227 | 210 nt | BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | OFD1P17-201 | ENST00000437639 | 3018 nt | BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AL606490.8-201 | ENST00000441624 | 319 nt | BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | CUBNP2-201 | ENST00000443534 | 1139 nt | BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AL445238.1-201 | ENST00000450029 | 712 nt | TSL 2 BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AC005154.1-228 | ENST00000454922 | 1405 nt | TSL 1 (best) BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | RPL7L1P3-201 | ENST00000455249 | 689 nt | BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AC112187.1-201 | ENST00000455837 | 479 nt | BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | RARRES2P3-201 | ENST00000457739 | 473 nt | BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | ANKRD46-204 | ENST00000519597 | 2779 nt | APPRIS P1 TSL 1 (best) BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AP000851.1-202 | ENST00000542119 | 743 nt | TSL 3 BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AC078789.1-201 | ENST00000547084 | 477 nt | TSL 3 BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AC078864.1-201 | ENST00000547538 | 512 nt | TSL 4 BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | DCN-218 | ENST00000551354 | 2924 nt | TSL 3 BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | ATP5A1P4-201 | ENST00000556888 | 1605 nt | BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | PYGO1-202 | ENST00000563719 | 2653 nt | APPRIS P1 TSL 5 BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AL354733.2-210 | ENST00000586211 | 647 nt | TSL 5 BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AL157938.2-202 | ENST00000588378 | 875 nt | TSL 5 BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AL589863.1-201 | ENST00000595383 | 631 nt | BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AC073046.2-201 | ENST00000604756 | 527 nt | BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | FO681491.1-202 | ENST00000623392 | 737 nt | BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | RBMS3-AS2-206 | ENST00000629296 | 438 nt | TSL 5 BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | UBA3-213 | ENST00000631029 | 123 nt | TSL 5 BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | AJ009632.2-208 | ENST00000635525 | 4123 nt | TSL 5 BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | ADGRL2-202 | ENST00000359929 | 4674 nt | APPRIS P2 TSL 1 (best) BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | SMG1P5-202 | ENST00000529428 | 4219 nt | BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | SMG1P2-201 | ENST00000566127 | 4221 nt | BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | ICE2-201 | ENST00000261520 | 7209 nt | APPRIS P1 TSL 1 (best) BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | RXFP2-201 | ENST00000298386 | 3319 nt | APPRIS P3 TSL 1 (best) BASIC | 4.48 | □□□□□ -1.69 | | |
| MUC4 | Q99102 | LINC00326-202 | ENST00000457339 | 2515 nt | TSL 5 BASIC | 4.48 | □□□□□ -1.69 | | |