Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RNF31Q96EP0 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF31Q96EP0 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 SNORA38B-201ENST00000363524 131 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 RNA5SP485-201ENST00000365053 119 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF31Q96EP0 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RNF31Q96EP0 RCC2P2-201ENST00000422174 918 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 AC092634.2-201ENST00000428146 1010 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 AC239367.3-201ENST00000428996 814 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 KCTD9P1-201ENST00000430462 1167 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 RPS10P21-201ENST00000430654 475 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RNF31Q96EP0 XKRY2-201ENST00000442362 1093 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 AC007000.2-201ENST00000442564 487 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 MTND2P8-201ENST00000450555 1025 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 H3F3AP5-201ENST00000475267 429 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 RN7SL382P-201ENST00000482631 282 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 AC104115.2-201ENST00000523026 687 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 SOX5P1-201ENST00000524155 1127 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 TDGP1-201ENST00000543961 1229 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 ULK4P1-202ENST00000565174 503 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 AC092718.4-201ENST00000566639 716 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 ANP32BP1-202ENST00000568553 737 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 Z99289.3-201ENST00000605586 594 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 AP000864.1-201ENST00000609424 650 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF31Q96EP0 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 AC006963.1-201ENST00000624003 1052 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 AL391261.1-201ENST00000555712 1479 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RNF31Q96EP0 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF31Q96EP0 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 AC096992.2-201ENST00000609553 1684 ntBASIC6.33□□□□□ -1.4
RNF31Q96EP0 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.33□□□□□ -1.4
RNF31Q96EP0 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF31Q96EP0 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF31Q96EP0 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF31Q96EP0 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.32□□□□□ -1.4
RNF31Q96EP0 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.32□□□□□ -1.4
RNF31Q96EP0 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF31Q96EP0 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
RNF31Q96EP0 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF31Q96EP0 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF31Q96EP0 AC022905.1-201ENST00000503430 3048 ntBASIC6.32□□□□□ -1.4
RNF31Q96EP0 CLCA3P-203ENST00000490028 2781 ntBASIC6.32□□□□□ -1.4
RNF31Q96EP0 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF31Q96EP0 LINC01616-201ENST00000561816 2280 ntBASIC6.32□□□□□ -1.4
RNF31Q96EP0 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF31Q96EP0 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF31Q96EP0 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF31Q96EP0 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF31Q96EP0 API5P1-201ENST00000424316 1510 ntBASIC6.32□□□□□ -1.4
RNF31Q96EP0 AC073365.1-203ENST00000641055 1992 ntBASIC6.32□□□□□ -1.4
RNF31Q96EP0 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
RNF31Q96EP0 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF31Q96EP0 RNU1-84P-201ENST00000365447 164 ntBASIC6.32□□□□□ -1.4
RNF31Q96EP0 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF31Q96EP0 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
RNF31Q96EP0 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF31Q96EP0 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF31Q96EP0 RN7SKP86-201ENST00000410454 332 ntBASIC6.32□□□□□ -1.4
RNF31Q96EP0 MTND2P16-201ENST00000419987 799 ntBASIC6.32□□□□□ -1.4
RNF31Q96EP0 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF31Q96EP0 AC009506.2-201ENST00000420635 840 ntBASIC6.32□□□□□ -1.4
RNF31Q96EP0 ZNF736P7Y-201ENST00000425158 820 ntBASIC6.32□□□□□ -1.4
RNF31Q96EP0 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.32□□□□□ -1.4
RNF31Q96EP0 GTF2IP14-201ENST00000441415 586 ntBASIC6.32□□□□□ -1.4
RNF31Q96EP0 COL11A2P1-205ENST00000441798 676 ntBASIC6.32□□□□□ -1.4
RNF31Q96EP0 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF31Q96EP0 MOB1AP2-201ENST00000446060 614 ntBASIC6.32□□□□□ -1.4
RNF31Q96EP0 MTND1P33-201ENST00000446251 917 ntBASIC6.32□□□□□ -1.4
RNF31Q96EP0 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF31Q96EP0 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms