Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 AL117692.1-201ENST00000494283 713 ntBASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 PRELID3BP5-201ENST00000508612 460 ntBASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 AC139713.1-202ENST00000512366 460 ntBASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 AC138517.1-201ENST00000515724 568 ntBASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 RN7SKP34-201ENST00000516142 244 ntBASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 DUX4L52-201ENST00000549363 777 ntBASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 AC093510.2-201ENST00000562820 896 ntBASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 AC091057.3-201ENST00000602684 733 ntBASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 AL133247.2-201ENST00000603236 482 ntBASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 ELOCP35-201ENST00000604289 336 ntBASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 MIR6849-201ENST00000618543 69 ntBASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SIMC1Q8NDZ2 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
SIMC1Q8NDZ2 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.27□□□□□ -1.4
SIMC1Q8NDZ2 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 AC007012.2-201ENST00000623206 1676 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 RNU1-55P-201ENST00000365510 158 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 SNORA70H-201ENST00000383910 135 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 SNORA70J-201ENST00000384182 135 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 RNA5SP474-201ENST00000391234 90 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 MIR541-201ENST00000401360 84 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 AL359694.1-201ENST00000403247 604 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 AL136100.1-201ENST00000407696 330 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 PTGES3P2-201ENST00000407942 482 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 LUZP4P1-201ENST00000415420 344 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 NME1P1-201ENST00000420914 382 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 SETP9-201ENST00000423837 832 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 GAPDHP57-201ENST00000424400 585 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 GAPDHP75-201ENST00000433910 943 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 AC046176.1-201ENST00000435260 1170 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 E2F6P3-201ENST00000441743 743 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 Z83846.1-201ENST00000446798 265 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 AL157884.3-201ENST00000448273 1184 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 HMGN1P5-201ENST00000448591 263 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 AL445669.2-201ENST00000454425 421 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 RPS3AP49-201ENST00000472161 790 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 RN7SL790P-201ENST00000474043 298 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 AC015864.1-201ENST00000496512 544 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 AC105313.1-201ENST00000509121 353 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 AC112198.4-201ENST00000515450 351 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 RN7SKP67-201ENST00000515905 235 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 OR7E13P-201ENST00000526052 910 ntBASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.27□□□□□ -1.41
SIMC1Q8NDZ2 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms