Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC020978.8-201ENST00000571975 3022 ntBASIC5.06□□□□□ -1.6
CCDC168Q8NDH2 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CCDC168Q8NDH2 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC168Q8NDH2 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC168Q8NDH2 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC168Q8NDH2 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC168Q8NDH2 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CCDC168Q8NDH2 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CCDC168Q8NDH2 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 AC130365.1-201ENST00000530524 1553 ntBASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 GABARAPL3-201ENST00000412799 354 ntBASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 AC245047.1-201ENST00000433276 873 ntBASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 RPS3AP15-201ENST00000483874 781 ntBASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 AL157831.2-201ENST00000564681 3095 ntBASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 AC127024.8-201ENST00000623719 2094 ntBASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 RNU1-46P-201ENST00000384425 164 ntBASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 FTLP8-201ENST00000446770 267 ntBASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 AL445466.1-201ENST00000448432 357 ntBASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 RPS17P15-201ENST00000475609 349 ntBASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 RAB9BP1-201ENST00000519581 626 ntBASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 MIR4480-201ENST00000582492 71 ntBASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 SUGT1P3-202ENST00000604259 383 ntBASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 AC005840.5-201ENST00000619166 599 ntBASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 AL034417.4-202ENST00000642135 2236 ntBASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 MGC15885-201ENST00000558940 2425 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC168Q8NDH2 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 RNA5SP350-201ENST00000363298 111 ntBASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 AP004607.2-201ENST00000533949 322 ntBASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 MELK-207ENST00000536860 2342 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 ERMN-202ENST00000409216 746 ntTSL 4 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC168Q8NDH2 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms