Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TTC9CQ8N5M4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TTC9CQ8N5M4 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
TTC9CQ8N5M4 AC016745.2-201ENST00000608834 3443 ntBASIC4.82□□□□□ -1.64
TTC9CQ8N5M4 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
TTC9CQ8N5M4 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC4.82□□□□□ -1.64
TTC9CQ8N5M4 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TTC9CQ8N5M4 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TTC9CQ8N5M4 AC016583.1-201ENST00000624221 2431 ntBASIC4.82□□□□□ -1.64
TTC9CQ8N5M4 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC4.82□□□□□ -1.64
TTC9CQ8N5M4 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 AC024587.1-201ENST00000505925 2157 ntBASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 AC087516.1-201ENST00000561236 2428 ntBASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 RNU105B-201ENST00000364478 208 ntBASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 RNU1-59P-201ENST00000364829 162 ntBASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 RNA5-8SP5-201ENST00000365304 152 ntBASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 NPM1P38-201ENST00000403835 865 ntBASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 RPS7P8-201ENST00000418311 581 ntBASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 RPL7AP51-201ENST00000422016 760 ntBASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 AL731534.1-201ENST00000434711 269 ntBASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 AC073476.1-201ENST00000452854 407 ntBASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 AC005017.1-201ENST00000482002 490 ntBASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 GUSBP9-201ENST00000510138 584 ntBASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 ARGFXP2-201ENST00000579304 949 ntBASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 RNU4ATAC-201ENST00000580972 127 ntBASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 SETP3-201ENST00000581726 813 ntBASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 U1.25-201ENST00000614085 162 ntBASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 U1.34-201ENST00000618578 162 ntBASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 U1.31-201ENST00000620022 160 ntBASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 MIR6813-201ENST00000621638 56 ntBASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 AC139426.3-201ENST00000605648 2059 ntBASIC4.81□□□□□ -1.64
TTC9CQ8N5M4 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 EIF3EP1-201ENST00000433978 1316 ntBASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 AC010266.2-201ENST00000564741 3255 ntBASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 RNA5SP375-201ENST00000362975 119 ntBASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 SNORD1C-201ENST00000363315 78 ntBASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 RN7SKP166-201ENST00000410812 305 ntBASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 RPL35AP31-201ENST00000418340 337 ntBASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.8□□□□□ -1.64
TTC9CQ8N5M4 THEM7P-201ENST00000419556 672 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms